Gene Pars_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0924 
Symbol 
ID5055884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp816772 
End bp817470 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content58% 
IMG OID640468480 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001153156 
Protein GI145591154 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.530377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCGG TCTTCGTCAT TGACGTAAAT AAATGCGTTG GATGCCGCGC CTGCGTAGCG 
GCGTGCATTA TCGAACACGG CCAAGTCTTT ACAGCCGCTA AGCCGTCTAA CCGCGGCAAG
CCGCAGACTG TGAAGCTGAG AACGTGGGTT GAGTGGAGAG AGGAGAGCAA CGGCAAGCCG
TCGAGGAAGT TCGTGTCTTC GCTTTGCTAC CACTGCGAGG ATGCGCCTTG TCAGAGGGTG
TGCCCAACAG GCGCCACGTA CAAGACGCCA GAGGGCGTGG TGCTGGTTAA CAAGGATCTG
TGCATAGGCT GTGGCTACTG CATTATTGCG TGTCCCTACG GGTCGCGCTA TAGGCCGGAG
CCGCACGAGT GGCACGAGGC TGAGAACAAG CCGCTTGTCA AGGAGGTGGA GCCCGCGACG
CAGTACGGCG GTGTGTTGTT CAAGCCGCCG GTGCCAAACA AGTGGGCGTT TAGAGTAGAC
GCGGTTGACA AGTGTACATT TTGCTACCAC CGGTACAAAG GCGATGGTAA GCTTTGGTCG
CCGGCCTGCG TGGAGGTCTG TCCCACCGGA TCCAGGATGT TCGGAGACTT AGATAACCCC
AACGACCCAG TGGCCGAGCT AGTACGCGGC GGTGTTGCGA AACTCGCTAG GCCTGATTTA
AAGACAGGTG GAAGAGTGTA CTACGTAGGG GGGCTATGA
 
Protein sequence
MRPVFVIDVN KCVGCRACVA ACIIEHGQVF TAAKPSNRGK PQTVKLRTWV EWREESNGKP 
SRKFVSSLCY HCEDAPCQRV CPTGATYKTP EGVVLVNKDL CIGCGYCIIA CPYGSRYRPE
PHEWHEAENK PLVKEVEPAT QYGGVLFKPP VPNKWAFRVD AVDKCTFCYH RYKGDGKLWS
PACVEVCPTG SRMFGDLDNP NDPVAELVRG GVAKLARPDL KTGGRVYYVG GL