Gene Pars_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0886 
Symbol 
ID5056261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp785141 
End bp786262 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content59% 
IMG OID640468447 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001153123 
Protein GI145591121 
COG category[C] Energy production and conversion 
COG ID[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.38221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAGAC GAGATAAGCC GTCGGTTATT ATAGCGAGGG GCCGCCAAGA CCTTAGGAGA 
CTCCTTTCTC AGACACCTCT CTACTTCGCC TACAGAGGCC CCGACGAGAA TTGGTTTAGA
GAAGTGGCTG AAAAACACTC AGAGACAGCG GAGTGGCAGA GCCTCCCACC AGAGGAGGCC
AAAACGGCGA CGCGTAGAGA TCTCATAACG GGGGGGTTTA TTAGGCTTAG GGACACTGTC
GTGGTGAGGC AGGATAAGTG CATCTGGTGC GGGCTTTGCG CCGGCTACTG CCCCGCCTCG
GCTTTTGAAT ACGTGGAGAG GGCCGTGGTG AGGGTGAAGT ACGACTTGTG CGTGGACTGC
GGGCTCTGCA ACTCGGTGTG CCCCGTAGAT GCCATAAAGA TGCCCTCACT GCCCGACACC
TATCTCGCGG ATTTGGTAAA AACGTCGAGG AGACCACTTA AGTTCATCTG CGACTACGCC
TTCGAAGACG GAGACGAGGA CGGGGTCAGG GTGAAGTGCA TAGCCGCCGT CCCCAAGCAG
TACTTATACC TAGCAGCGGC GAAGCACGGC GTTGCCTACG CCCACTGTTC AAGAGGCGAG
AAGTGCCCGC TTTGGCCCGC CGTCGAGAAG TGGTCCCAGG CACTGGGGAG GGAAGGCAAC
ACCTTCTACG TCAAGGCCGA AAAGGCGGCG CTGGAGCCGG GCGATAGGTG GCAGACGAGG
ATGCTGGCCA TCGCCGTAGG GATGCCGGCA GGCGTGGTTA GGGTAAAAGA GGGGTGCACC
CTCTGCGGCG CATGCGTCAA CGTCTGCCCC ACCGACGCCC TCTCCATAAA GGGGCACGAA
CTCCGCCTAG TCCCCGCCCT CTGCATAGCC TGCGGCGTAT GCGCAGAGAA ATGCCCAGAG
GGCGTCATAG AAATTAGGCA ACAGCCGGAG AAGAGACCCT ACGAGCCCGT CGTAATTTAC
CGCGACGCGC CGGCAAGGTG CGCCTCTTGT GGAAAGGAGC TGCCATATAC AGAAACAATG
GCCAAGAAGC TCGCCGAGAG GCTGAAGGCC AGTGGGTTGC CCCACGAACA CGTGTATCTA
TGCGAAGAGT GCCGCCTTAA CTCTTCCCCC TCTTCACCTT GA
 
Protein sequence
MIRRDKPSVI IARGRQDLRR LLSQTPLYFA YRGPDENWFR EVAEKHSETA EWQSLPPEEA 
KTATRRDLIT GGFIRLRDTV VVRQDKCIWC GLCAGYCPAS AFEYVERAVV RVKYDLCVDC
GLCNSVCPVD AIKMPSLPDT YLADLVKTSR RPLKFICDYA FEDGDEDGVR VKCIAAVPKQ
YLYLAAAKHG VAYAHCSRGE KCPLWPAVEK WSQALGREGN TFYVKAEKAA LEPGDRWQTR
MLAIAVGMPA GVVRVKEGCT LCGACVNVCP TDALSIKGHE LRLVPALCIA CGVCAEKCPE
GVIEIRQQPE KRPYEPVVIY RDAPARCASC GKELPYTETM AKKLAERLKA SGLPHEHVYL
CEECRLNSSP SSP