Gene Pars_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0704 
Symbol 
ID5055156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp626201 
End bp627100 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content62% 
IMG OID640468261 
Producthypothetical protein 
Protein accessionYP_001152942 
Protein GI145590940 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.258152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.502019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGAAA TTAGTTCGGA CTTACAAAAA GTGGCGAGGG AGGCGGCGCT GGACGAGTAT 
AAAGAGTATG TAACGTACTC GGCGCTGGCT AGGGCGGAGC GCAACCCGAG GCGGCGCGCC
GTCTTGGAGA GGCTGGCGGA GCAGGAGCTG GAACACTTCC GCTTCTGGAA CAAGTTCGCC
GGGGTTGCCC CGCCTGGCTG GTTTAGGCTG TACGCCTACT TTATGGTGTT TGTCCGGCTT
CTTCTGGGGG CGACGTTTGT GGCTAAGCTC CTGGAGCGGG GGGAGGAGGG GGCGGTGGGG
CGGTACCGGT CTGTTCTGCC GCTTCTCCCA GACGCCGACC GGGAGGCTCT TCTCAAGATT
ATTGCGGATG AGGAGGGGCA CGAGCGGGCT CTTATAGATC AGCTGGACGA GGCCGTTGTG
AAGTATATGG GGGCCCTGGT CTTGGGCCTG GCCGACGCCA TTATCGAGAT TACGGGGGCG
CACGCAGGGA CTCTCGGCAC TACTGACAGC ACGGTGGTGG CGGGGGTTAT TGGCCTTATT
GTGGGGGTGG GGGCTGCCAT CTCCATGGCC TCCGCCTCGT ACCTCCAGGC GAAGCACGAT
GTGGGGAAGT CGCCTGGCGT CGCGGCCTTG GCCACGGGGC TGAGCTACAT AGCGGCTGTG
GCCCTGCTGT CTCTGCCCTA CTTCCTGCTT CACGACGTCT ACCTCGCCTT CGCGGCGTCT
ATCACCGTGG GGGTCTTCCT GGCGTTTTTG CTGACCTTCC AGGGGGCTGT CTACGCTGAG
AGGGATTTCA AGTTTGAGTT TCTGCAGACT GTGGGCCTCC TCCTGGGCAC GGCCTTCCTC
ACGTACCTCC TCGGCGACTG GCTGGGCTCT GTGTTCGGCG TTAAGAAGCT GGTTGGCTGA
 
Protein sequence
MVEISSDLQK VAREAALDEY KEYVTYSALA RAERNPRRRA VLERLAEQEL EHFRFWNKFA 
GVAPPGWFRL YAYFMVFVRL LLGATFVAKL LERGEEGAVG RYRSVLPLLP DADREALLKI
IADEEGHERA LIDQLDEAVV KYMGALVLGL ADAIIEITGA HAGTLGTTDS TVVAGVIGLI
VGVGAAISMA SASYLQAKHD VGKSPGVAAL ATGLSYIAAV ALLSLPYFLL HDVYLAFAAS
ITVGVFLAFL LTFQGAVYAE RDFKFEFLQT VGLLLGTAFL TYLLGDWLGS VFGVKKLVG