Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0642 |
Symbol | |
ID | 5054396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 571130 |
End bp | 572317 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640468201 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001152885 |
Protein GI | 145590883 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.440176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATACCT ACCCTCTCAG AGGTGTAAGA ATTCTAGATC TCACAGCGGC CATGGCTGGT CCTTTTGCAA CTATGCTACT TGCTGACTTG GGCGCAGATG TGATTAAGAT AGAGCCGCCT GAAGGGGACC ACGCTAGGGA CTGGGGGCCG CCTTCATATG GTGAGAAGTA CAGCGCGTAC TTTGCAAGCG TTAACAGAGG CAAAAAGTCC ATTGTGCTGG ATTTGAAGAA GGCAGAGGCA AGAGAAGTCT TCTACCGGCT AGTCAAGACG GCCAGCGCTG TTGTTGAGAA CTTCCGACCT GGCGTGGCTC AGAAACTAGG CGTAGACTAT CATGCAGTTA AGCAACACAA CCCCAATATT GTATACTGCT CCATTTCGGG ATTTGGCGAG GGGCCTTATA GAGATCTCCC CGCATATGAT CTAGTAGCGC TGGCAATGTC AGGTCTTATG GATTTGACTG GTGAGCCGGA GGGCCCCCCG GTGAAATTCG CAGTGCCTAT TACCGACATA GCTGCGGGGT TCTACTGCGC CTTATCAATA ATAACGTCTG TTTTAACAAA TCGCCCAGGA TATATCGAAA TCCCGCTCAT TGAGGCGGCT ATCTCGTTGT TAACCCACCA GGCGGGTTAT TACTTCGCGA GCGGGGTGCC GCCTAGGCGT ATGGGTAGCG CACACCCGAC AATAGTCCCA TACCAAGCTT TTAGGGCCAA AGACGGCTAC TTCGTATTGG CAGTTGGTAG TGACCATTTA TGGAAAAAGT TCTGCGAGGC TATTGGAAGG CCGGAGTTAG CCGACGACCC CCGATTTAAT ACTAACACAA AGAGAGTACA AAATAGGGAG GAGTTAGTAA AGATGCTGGA AGAGCTATTT CTAGAGAAAG AGGTGAATTA TTGGGTATCG CTAATGTGGC AAAATGGAAT TCCTGCGGCC CCTGTGTACA ACTTGACACA GGTCTTCTCA GATCCTCATG TGCGATACAG AAAAATTGTA GTTGAAAGCC AGGGCCCATT TGGCGTGATC AAGACATTAA AATCGCCCAT AAATGCTGAA TCGATAAAAG TAGGAAACTA CACGCCGCCC CCCTTACTAG GTCAACACAC TGCTGAAATA CTAAAAGAAC TAGGCTACAC AGAAGAAGAA ATAGCTAAAC TTGCCGAGAG GGGGGCAATA ATCCTTCAAA AACACTAG
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Protein sequence | MHTYPLRGVR ILDLTAAMAG PFATMLLADL GADVIKIEPP EGDHARDWGP PSYGEKYSAY FASVNRGKKS IVLDLKKAEA REVFYRLVKT ASAVVENFRP GVAQKLGVDY HAVKQHNPNI VYCSISGFGE GPYRDLPAYD LVALAMSGLM DLTGEPEGPP VKFAVPITDI AAGFYCALSI ITSVLTNRPG YIEIPLIEAA ISLLTHQAGY YFASGVPPRR MGSAHPTIVP YQAFRAKDGY FVLAVGSDHL WKKFCEAIGR PELADDPRFN TNTKRVQNRE ELVKMLEELF LEKEVNYWVS LMWQNGIPAA PVYNLTQVFS DPHVRYRKIV VESQGPFGVI KTLKSPINAE SIKVGNYTPP PLLGQHTAEI LKELGYTEEE IAKLAERGAI ILQKH
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