Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0605 |
Symbol | |
ID | 5055003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 541024 |
End bp | 541707 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640468163 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001152848 |
Protein GI | 145590846 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.51526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.572168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTCG TGTCGAAAAA GGCCGTCGTC CAAGCCCGCT ACGTCTCGCC CGACGCCTAC ATATACGGCC CCACACACAT CGGAAGCGGT AGCTACGTAG ACGCGGCCGT AATTGGGTAC CCCACTCGCC AGAAGATACT AAAGGGCAAC GGCCCGCTGG ACGAGCTGAG CGACGGCGCG AAGATTGGCG AGTTGGTGAT TATTAGAAGC GGCGTGGTTA TTTACGAAAA CGCGGAGATC GGCGACGGCT GCGAGTTCGG CCACAACGTC CTAGTGAGGG AGCTAGCGAA AATCGGGCGT GGAGTGAGGA TAGGCACCAA CGCAATTGTA GAACGCGACG TGAAAATCGG AGACAGGGCC TGGATCCAGT CCATGGTCTA CATACCAAAC GGCACGGTGA TAGAGGAGGA CGTCTTCATT GGCCCAAATG CAGTTATCAC CAACGACAAG TACCCACCCA GCAAGAGGCT CGCCCCCGTA GTGATAAGGA GGGGCGCGGT AATAGGGGCG AACGCCACAC TCGTGGCGGG GGTCGAAATC GGGGAAGGCG CAGTGGTGGC GGCGGGTGCG GTGGTCACCA GAGACGTACC CCCCGGCGCC GTAGTCGCCG GGGTCCCCGC CCGGGTAATC GGAAAAGCTG AGGATTACCT GAAAAAACGG GCTATTTACG AGACTAGCGG CTGA
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Protein sequence | MGFVSKKAVV QARYVSPDAY IYGPTHIGSG SYVDAAVIGY PTRQKILKGN GPLDELSDGA KIGELVIIRS GVVIYENAEI GDGCEFGHNV LVRELAKIGR GVRIGTNAIV ERDVKIGDRA WIQSMVYIPN GTVIEEDVFI GPNAVITNDK YPPSKRLAPV VIRRGAVIGA NATLVAGVEI GEGAVVAAGA VVTRDVPPGA VVAGVPARVI GKAEDYLKKR AIYETSG
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