Gene Pars_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0544 
Symbol 
ID5055276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp488065 
End bp488448 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content54% 
IMG OID640468106 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001152791 
Protein GI145590789 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.478802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.402117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGA CCGTTACCTA TAAAGGCCAG TGGGTCGCCG TGTGTAATAT AGACGATCTT 
ATCGAGGGCG AGGCGAGCGT ATTTAAGGTC GGCGGCTACG AGGTTTACGT CGTCCCGATA
GACGGGGAGA TCCACGTGTA TTACGGCAGA TGCCCGCACG CATTCGGCGA GCTCGCCCCG
TCGGATTTCG ACGGGTCTAA GATCGTGTGT AATGTGCACC AGTGGGAATT CGACCCGAAG
ACTGGCGCCA GTATAAACCC CAAGGGAGCC AAGCTGTTCA GATTAGAAAG CGAGGTCAGA
GACGGAGTTC TGTACGTGAA AGTCCCCCAA ATGCCCGTGG TGGAGTTTAA AGAGAAGTAC
TTCAAGATGT ACGAGTGCCT ATGA
 
Protein sequence
MTVTVTYKGQ WVAVCNIDDL IEGEASVFKV GGYEVYVVPI DGEIHVYYGR CPHAFGELAP 
SDFDGSKIVC NVHQWEFDPK TGASINPKGA KLFRLESEVR DGVLYVKVPQ MPVVEFKEKY
FKMYECL