| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0490 |
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| Symbol | |
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| ID | 5056406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 437290 |
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| End bp | 438705 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640468052 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001152737 |
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| Protein GI | 145590735 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.450377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCC AAAGCGTGAT TGGGGTATTT GCAAAAAAAG CACGTGAAAT CTTAGGAGAG
GAAGGCGTTC TTCAAGAAGA AGTGGATCTA CTCGTCTACG AGCAAGACGG CACCTTGGCG
CTTAGAGGGA GAGCTGATGT CGTCGTCTTC CCGCGCACGA CGGAGGAAAT GGCGAAAGTC
GTAGAGCTTG CCTACAACTA CGACATTCCG ATTATAGGCA GGGGCTCGGG CACAAGCCTC
AGCGGCGGGG CGGTTCCCGT CAAGGGCGGC GTGATTGTGA GCACAGCCCG CATGAACAAA
GTTTTGGAGA TAGACTTAGA CAACGAAGTC GCAGTGGTCC AGGCGGGAGT CGTGAACGAC
TGGATAAACT CCTACCTAGC GCGGATGGGC TACCAGTACG CCATAGATCT GGGCTTCCAG
TATATGGCGG ATCCCGCCTC GCAGAGGATC TCCACGATAG GCGGTAACAT AGCCCATAAC
TCGGGTGGCG TTAAATGCTT TAAATACGGC GTGACGGTCA ACCAGATCAG AGGCCTCACA
GTGGTTTTGC CCACGGGCGA GGTGAGGAAG ATAGGCGGCA AGGAGTTCGA ACAAGCCGGT
TACGACTTGA TAGGCCTCTT GGCAGGCTCC GAGGGCACTT TAGCCCTAGT CGCGGAGGCT
GTGCTCAAGA TAGTCCCGAC CTACGAGACT TCGGCTACTA TACTTGCGAA ATTCGACGAT
CTGTCTGTGG CCGGCCGCGC CGTGTCGGCC GTCATAGCCT CGGGCGCCAT GCCGGTGGCC
ATGGAGCTCA TGGACAAGCT TGCTGTCGAG GCCGTCGAGT CAGGCCCCTA CGCTGGCGGC
CTCCCGAGAG ATGCCGAGGC GATCTTATTA ATACAAGTCG AGGGATCCCC GCCCGGAGCC
AAGGAAGAGG CCGCCAAGGT GGCTGAGATC TTGAGGAGAA ACGGCGCAGT GGGGGTCGAA
GTGGTCGAGG ACCCAGCGCG GGCCGCGAAA CTATGGGCCG CCAGGAAGCA AGCGTTCGGC
GCCATGGGCT TCGTAGGTCC CAACTACGTA GTCGAAGACG GCACGATACC CCGGAAGAAG
CTCGCTGAGG CCTTGATGAT AGCGAGGGCC GCCGGCGCGA AGAGGGGGCT TAGAGTTGCC
AACGTGTTCC ACGCAGGAGA TGGGAACCTG CATCCGTTGA TACTTTACGA CGAGAGGAAG
CCCGGCGAGC GGGAAAAAGC CATCGAGGCG GGTGAGGAGA TCCTCGAGGC TTGTGTGGAG
CTCGGCGGAA CGATAACTGG GGAACATGGA GTTGGTTACA TGAAGAAGAA GTTGTTGCAC
AAGATGTATA AGAGGGAGGA GATAGAGCTG ATGAAGGCGA TCAAAGCGAT CTTCGATCCT
AAGGGGCTCA TGAACCCCGG CAAGATATTC CCATGA
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| Protein sequence | MMRQSVIGVF AKKAREILGE EGVLQEEVDL LVYEQDGTLA LRGRADVVVF PRTTEEMAKV
VELAYNYDIP IIGRGSGTSL SGGAVPVKGG VIVSTARMNK VLEIDLDNEV AVVQAGVVND
WINSYLARMG YQYAIDLGFQ YMADPASQRI STIGGNIAHN SGGVKCFKYG VTVNQIRGLT
VVLPTGEVRK IGGKEFEQAG YDLIGLLAGS EGTLALVAEA VLKIVPTYET SATILAKFDD
LSVAGRAVSA VIASGAMPVA MELMDKLAVE AVESGPYAGG LPRDAEAILL IQVEGSPPGA
KEEAAKVAEI LRRNGAVGVE VVEDPARAAK LWAARKQAFG AMGFVGPNYV VEDGTIPRKK
LAEALMIARA AGAKRGLRVA NVFHAGDGNL HPLILYDERK PGEREKAIEA GEEILEACVE
LGGTITGEHG VGYMKKKLLH KMYKREEIEL MKAIKAIFDP KGLMNPGKIF P
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