Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0453 |
Symbol | |
ID | 5054621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 396108 |
End bp | 398096 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640468018 |
Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
Protein accession | YP_001152703 |
Protein GI | 145590701 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.840152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAAAGA TTGCGGTTAT TGGTGCCGGC ACAATGGGGC ATGGAATTGC TGAGCTTTTC GCCATCGCGG GCTATGAGGT TGCGTTGGTG GATATTGCTG AAGATTTTCT AAAAAAGGCT TTACAAAATA TTGAGTGGTC TTTGAGGAAG CTTGCGGAGA AAGGGCAGGT TAAAGAAGAT CCATCTGTTA TTCTTTCAAG AATTAAACCT ATTGTAAACG ACGTGTGTAA GGCGGTTGAG GGGGCTGAGC TCATGGTCGA GGCCGCGGTT GAGAATATAG ACGTGAAAAA GAAGGTGTTT TCGGAAGCTG ACCGCTGTGC TCCTCCAAAT GCCATACTTG CGACGAACAC CTCGTCGTTG CCTATCACGG AGATAGCAGA GGCGGTGAGG CCAGAGAGGA AGCCGCTTGT CGTCGGGATG CACTTCTTCA ACCCGCCTGT CCTGATGCCG CTTGTTGAGA TAATAAAGGG GGCTTACACA AGCGACGAGA CTGTGAAAAA GATTGCCGAC TACGCCGCGA AGCTTGGCAA GCAGACTGTA GTGGTGAATA AGGACGTGCC TGGGTTTATT GTAAATCGCA TACTTGCGAG GGTGAACGAG GCTGCGTGTT GGATGGTCGC CCGCGGCGAG GCTACAATAC AAGAGGTGGA CTCCGCCCTG ATGTACAAGG CGGGGTTGCC CATGGGCGCG TTTATACTCA TGGACTACAC CGGTATAGAC GTCGTATGTT TTATAGGAGA CGCCATGTTG AAGCGCGGCT TCAAGTCGCA TCCATGTCCT GTAATTACTC AGAAGTGTCA AGAGAAGAAG TTCGGCGTTA AGTCTGGCGA GGGCTTCTAC AAGTACCCAG CGCCGGGGAA GTTCCAGTGG CCGGAGGTGC CCAAGTCGGC TGGTGACAAG ATCGACGTGA CGTATCTACT AGCGCCAGCT GTAAACGAGG CTGCCTACTT ATTGCGAGAG GGGATTGCCA CCAGAGAGGA TATCGATAAG GCGGTGAAGT TGGGCCTCAA CTGGCCGAAG GGCCCGCTGG AATTTGCAGA TGAGCTGGGT ATAGACGCGG TGGTGAAGGC GTTGGAGACA TGGAGGCAAA AAACTGGATA TGAAGAGTAC GAGCCGGATC CGTTGCTTAA GGAAATGGTT TCGCAGGGTA AAACTGGCAA GAAAGCCGGC GAGGGGTTCT ACACTTACGT AAAGGCCGAG GAGAAGAAGT TAGAGACTCT CATAGTGCGC TACGAGCCCG GCGTTGCGTG GATAATTCTG AACAGGCCGG AGAGGCTCAA CGCCATTAAC CCCAAGATGG TCGAGGAACT CTGGAGGGTG CTGGACGAGA TCGAGCAGAT GGACTACGAA AAGGTGAGGG TGGTGGTGAT CACGGGCGCA GGCAGGGCGT TCTCCGCCGG GGCCGACGTG ACGGGCTTTA TGGGCGCCAC CCCCGTCACC ATCTTCAAGG TGTCGAGGAA GCTTCAGATG CTGTACGAGA GACTGGAGTT GTTGGACAGG CCGGTAATAT GCGGGCTGAA CGGCTACACG CTGGGCGGAG GCCTGGAGCT GGCCATGGCC TGCGACTTCC GCATTGCGGC TGAGACCGCC GAGCTGGGCC AGCCGGAGAT AAACCTAGGC TTCATACCCG GCGCCGGCGG CACTCAGCGC CTCGCTCGTC TAATCGGGAG GGATCGAGCC AAGGAGCTGA TATTCACAGG CGACAGGATA CCGGCTAGGG AGGCGGAGAG GCTTGGCCTT GTCCACAAGG TGGTGTCGCC TGACAAGCTT GAACAGGAGC TGAGGGCGTT CGCGGCTAAG CTCGCCGAGA AGCCGCCGCT GGCTCTCGCC ATGGCGAAAT ATGCCATAAA CTTCGGCCTG GAGGCGCCTC AATGGGTAGG GATGATGCTA GAGGCGACGC AGTTCGGCCT ACTGTTCAGC ACAGAGGATG TAATAGAAGG CGTGTCGTCG TTTTTGCAGA AGAAAAAGCC GCAGTTCAAA GGGAGATAG
|
Protein sequence | MPKIAVIGAG TMGHGIAELF AIAGYEVALV DIAEDFLKKA LQNIEWSLRK LAEKGQVKED PSVILSRIKP IVNDVCKAVE GAELMVEAAV ENIDVKKKVF SEADRCAPPN AILATNTSSL PITEIAEAVR PERKPLVVGM HFFNPPVLMP LVEIIKGAYT SDETVKKIAD YAAKLGKQTV VVNKDVPGFI VNRILARVNE AACWMVARGE ATIQEVDSAL MYKAGLPMGA FILMDYTGID VVCFIGDAML KRGFKSHPCP VITQKCQEKK FGVKSGEGFY KYPAPGKFQW PEVPKSAGDK IDVTYLLAPA VNEAAYLLRE GIATREDIDK AVKLGLNWPK GPLEFADELG IDAVVKALET WRQKTGYEEY EPDPLLKEMV SQGKTGKKAG EGFYTYVKAE EKKLETLIVR YEPGVAWIIL NRPERLNAIN PKMVEELWRV LDEIEQMDYE KVRVVVITGA GRAFSAGADV TGFMGATPVT IFKVSRKLQM LYERLELLDR PVICGLNGYT LGGGLELAMA CDFRIAAETA ELGQPEINLG FIPGAGGTQR LARLIGRDRA KELIFTGDRI PAREAERLGL VHKVVSPDKL EQELRAFAAK LAEKPPLALA MAKYAINFGL EAPQWVGMML EATQFGLLFS TEDVIEGVSS FLQKKKPQFK GR
|
| |