Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0447 |
Symbol | |
ID | 5055525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 390982 |
End bp | 391854 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640468012 |
Product | inner-membrane translocator |
Protein accession | YP_001152697 |
Protein GI | 145590695 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATAA CCCCATATTT TTTAACCGGT ATTATAATTG GCTCTATCTA CGGACTTACC ACCCTCGGCC TCAGCCTCAT TTTTGGAGTG CTCAGAGTAG CCAATGTGGC TCATGGAGCC TTTATCATGA TCGGCGCATA CGTCGCCTAC ACGGCGTTTG TGGCCTTAGC TATCCCTCCA TTCGCCTCTT CCCTCTTAGC TTTTGCAATC GGGATCGCCG CAGGCTACTT GGTATATGCT GGGGTTATCA AGAGACTGGG GAAGGCGGAG TTGAATATCT TAGTCGCCTT GTTCGCGCTC GGCGCCCTGC TCGCAGAGGT AGCGAGGCTG ATCTGGGGAC CCGACTTCGT GGGCTACAAG TGGACCATAG GCTCCGTAGA GATCGCAGGC CTCCAGATAG AGCTGACTAA GCTAATCGGC GCCGTCTTAG CCCTTCTAAT AACCATAGCT TTGGAGCTGG TGTTAAGGAG AACCTACTTC GGCCGCGCGG TGAGAGCCGT TGTACAGGAC CCAGTCGGGG CGATGGTAGT TGGGGTAAAC GTAGATAGGG TATTCGCCTT TAGCTCCGCC CTGGGCATAG CAATTACAAC ACTCGGAGGC GTGTTCCTCA CCCTGTTCAT CCCAGTCGGG ATTAATCCCT ACATGGGCGG CCCCTACACG TTGATAGGCT TCGTCATCGC CGTGATGGGG GGCCTCGGCT CAGTGGCCGG CGCCTACGTC GCTGGGTTGC TGTTCGGCGT CTTTGAGTCT GTGGGGTTCT ACTTCTTCTC GCTCGCAGGC TTCGCCGAGC CCTCGCAGAT GGCGCTTTTC CTCGCATTCG TCATGCTTCT GCTCATACTA CTGTTAAGGC CGACCGGGCT GTTTAGGATA TGA
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Protein sequence | MDITPYFLTG IIIGSIYGLT TLGLSLIFGV LRVANVAHGA FIMIGAYVAY TAFVALAIPP FASSLLAFAI GIAAGYLVYA GVIKRLGKAE LNILVALFAL GALLAEVARL IWGPDFVGYK WTIGSVEIAG LQIELTKLIG AVLALLITIA LELVLRRTYF GRAVRAVVQD PVGAMVVGVN VDRVFAFSSA LGIAITTLGG VFLTLFIPVG INPYMGGPYT LIGFVIAVMG GLGSVAGAYV AGLLFGVFES VGFYFFSLAG FAEPSQMALF LAFVMLLLIL LLRPTGLFRI
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