| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0267 |
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| Symbol | |
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| ID | 5056111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 239323 |
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| End bp | 240018 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640467845 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001152532 |
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| Protein GI | 145590530 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0342264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCGTTGC CGATCCGCGA CATAAACCCT CCGAGGACGT ATCCCTACGT GACAAAAGCC
CTGGTCTTTA TCAACATTGC TGTATTCATC TACGAGTTGG TAAACCCGGA TATTATACTC
CAATATTCCC TCATACCGGC GTATGCTTGG GATCAGCCGT ATAGGTGGGT GACCCACATG
TTCCTCCACG GGGGGCTCCT CCACATAGTC GGCAATATGA TATACCTCTG GGTGTTTGGC
GACAACGTAG AAGACCACTA CGGCCACCTA CGCTTTCTCG TCTTGTACCT CATGTGGGGA
TTCGCAGCGG CTTTTGTCCA ATACCAAATC ACGGCGTGGC AGACGGCCGC CATGGCCGCG
GTGGGGCCTT TCAACAACCC GATGTATACT CCAATGCTTG GAGCATCTGG CGCCATAAGC
GGGGTGCTGG GGGCATACAT GATCCTCTAC CCAAGAGCCA CCATAGTGAC ACTAGTCTTC
TTCTTTGTCA TCACGATAGT CGATATCCCG GCGTGGGTCT ACATAGGATT TTGGTTTCTC
TACCAGCTCT TCTACGGCGC AGTGGATTTA TTCACCCTAC AACCAAGCGG GGTGGCGTAC
TTCGCGCACA TAGGAGGTTT CCTCGCAGGT GTGCTAACCG CAATGATCTA TAGAAGAAAG
CAGAAAATTT ACTATTGGTA TTGGTATTCT ACATAG
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| Protein sequence | MALPIRDINP PRTYPYVTKA LVFINIAVFI YELVNPDIIL QYSLIPAYAW DQPYRWVTHM
FLHGGLLHIV GNMIYLWVFG DNVEDHYGHL RFLVLYLMWG FAAAFVQYQI TAWQTAAMAA
VGPFNNPMYT PMLGASGAIS GVLGAYMILY PRATIVTLVF FFVITIVDIP AWVYIGFWFL
YQLFYGAVDL FTLQPSGVAY FAHIGGFLAG VLTAMIYRRK QKIYYWYWYS T
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