Gene Pars_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0253 
Symbol 
ID5055503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp222490 
End bp223272 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID640467832 
Productxanthine dehydrogenase accessory factor 
Protein accessionYP_001152519 
Protein GI145590517 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0909345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.275043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACATG CCGTGTCTGT ATGCGACGTC CTGAGGGCTC TCGACGTGGC CGCGCGCCTG 
GGGCCTACCG CCGTGTTGGT GAGGGCCTAC GATGGGAGGC GTTGGGTGGT TGACATAGTT
GCCGATGGGA GGGCCCTCCT CGGTTTTTTG CCCAGTTCTG TGGTGAGGGA GTTGCCGAGG
TTAGAGAAGC AGGGGGAGAA GTTCGAGGGG AAGATAGGGG ATTTATACGT CTCAGCAGAG
GTGGTTTTAG TAAGGCCTAC CCTCGTCGTG GTGGGCTTTG GCGAAGTCGC GAAGAAGGTG
TCGCAGGTGG CTGTAGCGGC CGGCTTTAAC GTGGTGGCCA TTGGGCACAG ATCGGAGGCG
GCTCAGCACT CCGGCGGCTT GGAGGAGCTT GGGGACTTCC TCTGGGAGGG CTCGGCGGTG
GTTATCGCCA ACGAGGGCGG TCATCTCTCA GACGTCGACG TGGCTGAGCT GGCTCTCAGA
AGAGGCGCCG GCTACGTGGC CCTCTTGGCC AGCCAGAAGA GGGCCGCCCT TGTGATAAGG
GAGCTGGAGC GGAGGGGGAT TCCGCCGGCG GAGATCGACA AGAGACTTAG ATCGCCCGCC
GGCTTGGACA TCGGGGCTAA AACCGCCGGA GAGATAGCAG TGAGCATAGT CGCCGAAGTT
GTGATGTACT TCAGAGGAGG TACAGGCAAG CCGATGAGGG AGGTGAAAAA CCCGCGGAGC
GTGGCGCTTA GCGAGGGCGA AGACTTGTCT AAATACCGGT GCGAGTGGAG ACCCCCCAGC
TAG
 
Protein sequence
MAHAVSVCDV LRALDVAARL GPTAVLVRAY DGRRWVVDIV ADGRALLGFL PSSVVRELPR 
LEKQGEKFEG KIGDLYVSAE VVLVRPTLVV VGFGEVAKKV SQVAVAAGFN VVAIGHRSEA
AQHSGGLEEL GDFLWEGSAV VIANEGGHLS DVDVAELALR RGAGYVALLA SQKRAALVIR
ELERRGIPPA EIDKRLRSPA GLDIGAKTAG EIAVSIVAEV VMYFRGGTGK PMREVKNPRS
VALSEGEDLS KYRCEWRPPS