| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0211 |
|---|
| Symbol | |
|---|
| ID | 5055438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 190298 |
|---|
| End bp | 191203 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640467790 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001152478 |
|---|
| Protein GI | 145590476 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGT ACGTAAACTT CAACTTGCCA AAAGAGGCGG AGGAAGAGCT GGGAAGGTAC
TATAAAATCG TCAAGGGGGG TGATCTGAGC GGTGTCGAAG TGGCGTTTGT CTATAGGCTC
AGCCCGGAGG AGTTGAAAAA GATGCCGAAG CTGAAATTTA TCCAGGTGGT ATTAGCAGGC
CTAGATCACT TGCCTTGGGA GCATATCCCA CCCCACGTGG TTGTGGCGGG CAACGCCGGT
TCAAACGCTG ACGCTGTTAC CGAATTCGCG CTGGGCCTCC TCCTCGCCTC CTACAAGAGG
ATAATACACT ACAGCGAGAA AATGAGGCGT GGCGACTATG ACAAAAACCT TGAAGTGCCT
CTTCTCCAAG GCAAAAAAGT AGCTGTCTTG GGCCTCGGCG AAATCGGCAT AAGGGTTGCG
CGGCTTATCG CGGCGCTTGG AGCGGAGGTT TGGGGCTTTG CCCGGACACC TCGGGAGGGA
CCGTGGCGCT TCACCTCAAG CCTAGAGGAG GCGCTTAGGG GGGCCAAGGC GGCGGTCTGC
GCCCTGCCGC TGACTCGGCG CACTAGGGGG CTGATAAGAT ACGAGCACTT GGCGCTTATG
GCGGAGGACG GGGTATTCGT CAACGTGGGG AGGGCCGAGG TTGTTGACAG GGAGGGGGCG
CTGAGGATTG TGAAGGAGAG GCCGCGCTTC GTCTTCGCCA GCGACGTGTG GTGGGGGCGC
AACGACTTCG CCAAGGACGC CGAGTTTTTC TCGCTACCCA ACGTGGTCGC GACGCCGTGG
GTCGCCGGGG GATACGGAAG CGAGGAGGTG TGGCGCAAGA TGGTGATGGA CGCCGTCAAG
AACCTCATCG CCTACGCCAC TGGCGGCGTT GTTAGGAACA TCGCCCGGAG AGACGACTAC
TTGTAA
|
|---|
| Protein sequence | MELYVNFNLP KEAEEELGRY YKIVKGGDLS GVEVAFVYRL SPEELKKMPK LKFIQVVLAG
LDHLPWEHIP PHVVVAGNAG SNADAVTEFA LGLLLASYKR IIHYSEKMRR GDYDKNLEVP
LLQGKKVAVL GLGEIGIRVA RLIAALGAEV WGFARTPREG PWRFTSSLEE ALRGAKAAVC
ALPLTRRTRG LIRYEHLALM AEDGVFVNVG RAEVVDREGA LRIVKERPRF VFASDVWWGR
NDFAKDAEFF SLPNVVATPW VAGGYGSEEV WRKMVMDAVK NLIAYATGGV VRNIARRDDY
L
|
|---|
| |