| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0207 |
|---|
| Symbol | |
|---|
| ID | 5054131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 187527 |
|---|
| End bp | 188648 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640467786 |
|---|
| Product | uncharacterized linocin/CFP29-like protein |
|---|
| Protein accession | YP_001152474 |
|---|
| Protein GI | 145590472 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.502019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTCT CGAAGAACCC GGTAGACATT ACTAGGGACA GAAAGTTGTC CTCTGGAGAG
ATCGCCGACT CGCTTAGGCT TGCCATTATG GCCGAGCTAG ATGCCATAAG CCTATATCTC
CAATTGGCCA GGCTAATCGA CGACGAGAGA GTAAGGAAGG TCTTTGAGGA CATAGCTAAG
GAGGAGAAGA CGCACTTCGG CGAATTTCTC GCACTGCTTA AACACATCGA CCCCGAGCAG
GTGGAGCAGT TGAAGGCAGG CTTGATAGAA GTCGGCGAGC TGACAGGCAT AAAGGCGCCG
ATGAATGATC CCGACAATAA GCGGGTTGGC GAGTCTAACG CGCGCAGTGA TCCGCCGCCT
GACGTGGTCT CTTCGTCGGG CCTAAGCCCC GAAGAGCTCA GGTACTTGCA GAATAGGGTG
AGGGAGGTCT CCGGCAAGGT GAGGAGGTTT AGGAGGTATC TTGCGACATA TGAGGCGGGC
CCCGGGGTCG ACGCAGTGCC GCTGGAGGAG GCGGCCCCCG GCCCCACAAT AGCCGCTAAT
AGGTCGGTGG TGCCGCTTAA GGAGCTGAGC GTGAAGTTCT CCATATCGCA GAGGCAGATC
GAGTACGCAA GAGCTAGGGG CGAGGCGGTC TACTCGACGT CGGCGGATAG GGCAGCGGTT
AGGCTAGCGT ATGAGGAAGA CGCAACAATA CTCGGCGATA TTCTGGGCAA CCCGAAGGTC
AAGACAATGG GCATCACGTC GTGGGACGCG CCGGGGTCTG CCGTAGCTGA GGTCTCAAAC
GCCGTAAATC TGCTTTACAG CAACTACGTG CCCGAGCCCT ATGTGTTATT TGTAAGCCCC
GGCAGATTCA CGAAACTCTT GACAGTTGTC GAGAAGACTG GCGTCATGGA GCTGACGAGA
GTTAAGTCCC TAGTTCAAGA CGTCGTCGTG GTGCCCCAAC TGAGAGACGA CACGGCACTG
TTGCTGTCAA CCCACCAATC AATCATCGAC GTAGCCGTAG GCGTAGACAC GGCGCTGGTA
TACCTCGGCC CCGAAGACGG TACACACGGG TTCAACTTGT GGGAAACCTT GGCGGTGAGG
ATCAAGGATC CCAACGGCGT AGTAGTACTA AAACAAACGT AG
|
|---|
| Protein sequence | MVFSKNPVDI TRDRKLSSGE IADSLRLAIM AELDAISLYL QLARLIDDER VRKVFEDIAK
EEKTHFGEFL ALLKHIDPEQ VEQLKAGLIE VGELTGIKAP MNDPDNKRVG ESNARSDPPP
DVVSSSGLSP EELRYLQNRV REVSGKVRRF RRYLATYEAG PGVDAVPLEE AAPGPTIAAN
RSVVPLKELS VKFSISQRQI EYARARGEAV YSTSADRAAV RLAYEEDATI LGDILGNPKV
KTMGITSWDA PGSAVAEVSN AVNLLYSNYV PEPYVLFVSP GRFTKLLTVV EKTGVMELTR
VKSLVQDVVV VPQLRDDTAL LLSTHQSIID VAVGVDTALV YLGPEDGTHG FNLWETLAVR
IKDPNGVVVL KQT
|
|---|
| |