Gene Pars_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0183 
Symbol 
ID5054642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp165296 
End bp165694 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content53% 
IMG OID640467762 
Producthypothetical protein 
Protein accessionYP_001152450 
Protein GI145590448 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.7709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGAGT TTCAGGTCAA GACCCGCGCC CAAGAGGAGA TTGTGGTGAT AACGTCTCAG 
GTAGAACAGG CAGTGGAGCG AAGCGGTGTG AAGAATGGTA TTGTACTTGT CTACGCCCCG
CACGCCACTG CGATAATTAC GGCAAACGAA AACGAGCCTA GGCTTAGGGA GGATGTATTA
GGGAAAATAC GCACGCTGTT TCCAAGAGGC GCCGGCTATA AACACGACGA GATCGACGAC
AACGCAAACG CGCATCTGGC AAATATATTT CTCGGCTTTC ACATAGTGAT GCCTGTGGTG
GGCGGCAAGA TTAGGAGGGG GACTTGGCAG GAGGTGATGC TTATAGAAAT GGATGGCCCC
CGCACCCGCC ACATCGTGGT GATTGTGCTC GGCGAATAA
 
Protein sequence
MEEFQVKTRA QEEIVVITSQ VEQAVERSGV KNGIVLVYAP HATAIITANE NEPRLREDVL 
GKIRTLFPRG AGYKHDEIDD NANAHLANIF LGFHIVMPVV GGKIRRGTWQ EVMLIEMDGP
RTRHIVVIVL GE