| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0112 |
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| Symbol | |
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| ID | 5054945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 97498 |
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| End bp | 99630 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640467691 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001152379 |
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| Protein GI | 145590377 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.757622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGG ATGTCTCTGA GCTTCCTCTT GACGGGAGGC TTATCTCTGT CCTCAAGGAG
AGGGGCGTGA GGGAGCTGTT CCCGCCGCAG GTGGAGGCGG TTAAGGCCGG GATCTTCGAC
GGGGCTAACG TCCTCTTGTG CACAGCGACT GCTTCTGGGA AGTCCCTCCT AGCCGAGGTG
GCCTCAGTAA AGGCGGCCCT GGAGGGGAGG ATGGCCTTGT ACGCGGTGCC GCTTAAGGCT
TTGGCCCAGG AGAAGTTGCT CCACTTCTCC CACTACAGGA GCCTAGCAAA GGTCGGCATA
TCTACGGGGG ATTTTGAGTC CGACGACAGG AGGCTCTACG AGTACGACGT GGTGGTGGTG
ACTTACGAAA AGCTGGACAG TCTCCTCCGC CACCGGCCGA GCTGGCTGAG CTCCGTCGGC
GTGGTGGTTG TCGACGAGAT ACACTACCTG GGCGACCCCA AGAGGGGGCC CGTCCTGGAG
TCTATAATTG CCAAGATAAG GCACCTGGGC CTAAGGGCTC AGTTCATCGG CCTAAGCGCC
ACGGTGGGGA ACGCGGCGGA AGTTGCGGAG TGGCTTGGCG CTCGGCTGGT AAAGTCGAGC
TGGCGGCCTG TGCCGCTTAG GGAGGGGGTC TACTACGGCG GCAGGATATA CTTCCCCGAC
GGGGCCCACA AGGCTGTCGG CGCCTCCGGC GAAGCCGAAG TGGCCCTTGC CCTGGACGCG
GTGGCCGGCG GGGGGCAGGC GCTGGTCTTC ACGAACAGCA GGTCGTCAAC TGCGCGTATT
GCAAAGGCGG TGGCTAAGGC CGTGGCGGCC TACCCGGCGC AGCTCATAAA TCCTGGCGAG
GCGCGGGCCT TGGCTGAGGA GGTGCTTAGG GTCTCTTCCA GCAAGATCAT CGGTAGGGAG
CTGGCTGAGC TGGTGGCACG CGGCGTGGCC TTCCACAACG CGGGTCTCGA GCTGGAGGTG
AGGAGGCTCG TGGAGGAGGG GTTTAGGAGG GGGGTTGTAA AGGTCGTGGT GTCGACGACG
ACTCTGGCGG CTGGGGTCAA CCTGCCGGCT AGGCGCGTCG TGGTGGCGGA ATACGAGAGG
TACGACCCAG TGGTGGGGAG GGAGGAGATA CCTGTGTTGG AGTATAGGCA GATGGCGGGG
CGTGCGGGGC GGCCGGGGCT GGATCCCTAT GGCGAGGCCG TTATTGTCGC CAGGAGCAGG
GGGGATGTGG AGTACCTCAT GGAGAGGTAT GTCATGGGGC AGGTGGAGAA TGTGAGGTCG
CACATCCTCT CTGCCCCCAA TCTCAGATCC CACGCGCTCG GTGCCGTGGG CGGCGGCTAC
GCCAAGTCGG TAGACGACCT CGTGGACTTC TTCTCAAACA CCTTGGGCTT TCACCAGGCC
AAGACGCCTC TTAAGTCCTC CCTCCTCCGG TCTAAGGTGG CTGAGGCCCT GGACGAGTTG
GTGGAGTGGG GATTCCTGGA GCGGGATGGC GACGTGGTGT ACGCCACTGA GCTCGGCAGG
CAAGTGGCGA GGCTGTACCT GGATCCCGAA GTCGCCGCCC GCTACCTCTC CATGCTGAGG
TCTATGCGGA GGGGGTCTAT CTACGCGTAC CTCTACGTCG TATTGACCGC TCCTGATTTC
CCCAGGGTTA GGCGGGGGAG GTTGGCGGCG GATGTAGCCC GCGAGGTTTT GGCGGCTCTG
CCCGACGTCG AGGAGGACGA GGAGTTTGAA GACGTGGCGA GAACAGCGGC GATGTTGATG
GCGTGGATAG AGGAGGAGGA TGAGGACAAG ATATACGAGC GCTTCGAGGT GGCGCCTGGC
GACTTGAGAG TGTACGTGGA CCTCTTCGAG TGGCTTGGAA ACGCCGCGGC TAAGCTGGCC
GGCATGGTGG GGCTTGAGGA GCACAGAAGA AGTCTAGAGG TCCTCACCGC GAGGGTGGTG
CACGGCGTGA GGGAGGAGCT CATCCCGCTG GTCACTGCTC TTAGAGGCGT GGGGAGGGTC
CGCGCCAGGG TGTTGTACAA CTTCGGCTTC CGGACTTTGA GAGACATCGC CAGGGCCTCT
GTGAGGGAGA TCGCCTCTCT CCCCGGCTTC GGCGAAAAAC TCGCCGAGTC TATCATAGAA
CAGGCAAGAC AGTTAGTAGA GGGCAACGCC TAA
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| Protein sequence | MAVDVSELPL DGRLISVLKE RGVRELFPPQ VEAVKAGIFD GANVLLCTAT ASGKSLLAEV
ASVKAALEGR MALYAVPLKA LAQEKLLHFS HYRSLAKVGI STGDFESDDR RLYEYDVVVV
TYEKLDSLLR HRPSWLSSVG VVVVDEIHYL GDPKRGPVLE SIIAKIRHLG LRAQFIGLSA
TVGNAAEVAE WLGARLVKSS WRPVPLREGV YYGGRIYFPD GAHKAVGASG EAEVALALDA
VAGGGQALVF TNSRSSTARI AKAVAKAVAA YPAQLINPGE ARALAEEVLR VSSSKIIGRE
LAELVARGVA FHNAGLELEV RRLVEEGFRR GVVKVVVSTT TLAAGVNLPA RRVVVAEYER
YDPVVGREEI PVLEYRQMAG RAGRPGLDPY GEAVIVARSR GDVEYLMERY VMGQVENVRS
HILSAPNLRS HALGAVGGGY AKSVDDLVDF FSNTLGFHQA KTPLKSSLLR SKVAEALDEL
VEWGFLERDG DVVYATELGR QVARLYLDPE VAARYLSMLR SMRRGSIYAY LYVVLTAPDF
PRVRRGRLAA DVAREVLAAL PDVEEDEEFE DVARTAAMLM AWIEEEDEDK IYERFEVAPG
DLRVYVDLFE WLGNAAAKLA GMVGLEEHRR SLEVLTARVV HGVREELIPL VTALRGVGRV
RARVLYNFGF RTLRDIARAS VREIASLPGF GEKLAESIIE QARQLVEGNA
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