Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0074 |
Symbol | |
ID | 5056000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 69743 |
End bp | 70510 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640467652 |
Product | hypothetical protein |
Protein accession | YP_001152341 |
Protein GI | 145590339 |
COG category | [S] Function unknown |
COG ID | [COG5373] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.100299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACATCG AGCTCTTCGT GGTGGCCGGG CAGTCGGCTG AGCTTGAAAA CTCTCTTAAA AAAGTCGTGG AGGATCTCAG GGGGCAGGTC CAGAGACCTG ACAAGATTAG GCTTGCCACA GTGAAGATTA GGCCAGACGC GGTGGATCAG GTGCTGAGAC TTGTGGGGGA GCCGCCCGAG AGGGTGCCTC CGCACTACAG ATCTCTTGTG AATATGTTGA AGAAGTACGG AATTACGAGG TTCCCCGCCG TCGTCGTCGA CGGCGTAAAG GTGGGAGAGG GCGATGTGGC CGTGGAAAAC GTTCTTCGGG CAATTCAAGA CAGGGCCCGT GCGGAGTTTC CAGAACTTGC CTCGCTGGAG CTTGTCCCGC CGAGGCCTAC CCCGGCCCCC GTTCAGCCTG TGGTGAAGGA ACTGCCGCCG CCCCAGCCGG TAGCCTCGCC TCCTCCCCCG CCGCCTGCTC CACCTCCCCC GCCTCCCCCA CCCGAAATCA CGCCGGTGGA GGCTGTCTCC CCCAGAGCCG AGCCCAAGCC TATTGAGCCC TCCCCGCCGC CTCCTCCGCC TGCGATTGCT CCCCCTCCAC CTCTTCCGCC CCCTCCAGTT GCTCCGCGTG CCCTCACGGC TGTTGTGAAG CTGGTCTTGG GGCGGCCTGA CAACTGTGGG GAGTGTGCGT ACTACGGCCA GTTGACGTCG CGTTGTTTCT TGTTCGGCTT CGCGGTGTCT AATCCGGCTT CGCCGCCTTG CAAGCAATAT GCTAGAAGTG GAGGTTAA
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Protein sequence | MYIELFVVAG QSAELENSLK KVVEDLRGQV QRPDKIRLAT VKIRPDAVDQ VLRLVGEPPE RVPPHYRSLV NMLKKYGITR FPAVVVDGVK VGEGDVAVEN VLRAIQDRAR AEFPELASLE LVPPRPTPAP VQPVVKELPP PQPVASPPPP PPAPPPPPPP PEITPVEAVS PRAEPKPIEP SPPPPPPAIA PPPPLPPPPV APRALTAVVK LVLGRPDNCG ECAYYGQLTS RCFLFGFAVS NPASPPCKQY ARSGG
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