Gene Pars_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0062 
Symbol 
ID5054922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp47928 
End bp48773 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content52% 
IMG OID640467642 
Producthypothetical protein 
Protein accessionYP_001152331 
Protein GI145590329 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.853485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTA GGAAGCCGGC TGTGGCTGGT TACTTTTACC CGGCTGAGAA GGAGAAGCTA 
ATTCAACAAA TTGACTGGTC TATAAAGCAT GAGCTTGGCC CAAAGGCGTT GCAGATGCCG
AAATTGGGGG AGAAGGCGTT GGGAGGAGTT GTGCCGCATG CTGGGTACAT ATACTCGGGT
CCCGTGGCGG CGTGGCTGTA CTCCGCGCTT GCTGGCTACG GGAAGCCTGA CGCCATTATC
ATAATTGGCC CCAACCATTA CGGGATTGGG GCGCCTGTTG CTGTTATGAA ATCGGGAGTG
TGGGAGACGC CTCTAGGGCG CGTCGAGGTA GACGGCGATC TCGCCGAGTT GATTATGAGA
CATTACAAAG GGGTTGAGGA CGACTTCTAC GCATTTTCTA AGGAGCACTC TGTGGAGGTG
CAAATACCCT TTATCCAGTA CTACTTTGGA GACGTTAGGA TCGTCCCTAT TGTGGTGTGG
AGGCAGACTC TTTCAACTTC AAGAGAGTTG GGGAAGGCGG TGGCCACCGC AATACGGGAG
TACGGGAGGT ATGTGTACGT GCTGGCAAGC TCAGATTTTA ACCACTACGA GCCCCACGAA
GTGACTGTAC AAAAGGACGA CATGGCTATA AGCAAAATCT TAAAGGTCGA CGAGGCGGGG
CTTTTCGAAG TTGCCTCTAA GTTTGACATT TCTATATGCG GGCTGGGGCC AATAGGCGCA
CTCATCGTCA TAGCTAAAGA GCTTGGGTTT GGCAACGTGA CGTTGTTAAA ACATGCAACT
TCAGGCGATA CAAGTGGGTA CAAGGACGAA ACTGTGGGGT ATGCGAGTAT ATTGTTCCAC
CGTTAG
 
Protein sequence
MRVRKPAVAG YFYPAEKEKL IQQIDWSIKH ELGPKALQMP KLGEKALGGV VPHAGYIYSG 
PVAAWLYSAL AGYGKPDAII IIGPNHYGIG APVAVMKSGV WETPLGRVEV DGDLAELIMR
HYKGVEDDFY AFSKEHSVEV QIPFIQYYFG DVRIVPIVVW RQTLSTSREL GKAVATAIRE
YGRYVYVLAS SDFNHYEPHE VTVQKDDMAI SKILKVDEAG LFEVASKFDI SICGLGPIGA
LIVIAKELGF GNVTLLKHAT SGDTSGYKDE TVGYASILFH R