Gene Paes_2400 details

Gene Information

• Locus tag: Paes_2400
• ID: 6459038
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prosthecochloris aestuarii DSM 271
• Kingdom: Bacteria
• Replicon accession: NC_011061
• Strand: -
• Start bp: 59409
• End bp: 61358
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642729128
• Product: TPR repeat-containing protein
• Protein accession: YP_002019742
• Protein GI: 194335176

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.179753
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTGGA AATGGAATCA TATCCGGATC AAGGGGGACA ATAATCTTGT TCTTCAGGAT 
GCTGATGGCA ACACCACAGC TATTGCCATT ACAGCATTCA TTGAACAGTT CACAAAAGAA 
AAGGATGATC GCATTAGGTT GCTTGATGGA TGGCTTAGCG ACAAGGAGAA GATTGAGCGT 
TTTGCTGAAG CTGAGCGAAT CCGTTTGCAG AAGGAGCTTC TAATACTCCA GGAAGAAAAA 
GTAGCTCTTG AAGAGCAGGT GAAGACTCTG TTACAGGAAT TCAGTGACAA GGATATTACC 
GCAACAGATT CCCTGTATCA GAATGCTTTT GCATTATTTA TGGATGGCAA GGTGGATGAT 
GCACTAGGTG TTCTGGATGA GGTCATTTTT GAGGCAAGGG AGAAACAACT GCAAGAGGAG 
AGAACAAAAC AGGCAGAAAC CCGGATACTT AAAGCCGAAT TACTCCAGAT GAAGTTTGAT 
TTCAAGGGAG CATCTGAGCA ATATGACAGA GCTCTTGCGA TTGATGCTTC CTGGGGTATA 
CATATGAAGA CGGCCGCTTT CCACTGGTTT CTTAATGATT TTTCAAAGGC TTACACGTTT 
TACCGACAAG CCTTAGCATT AGCTGACACT TCAGCAGAAA AGGCGATGAC GCTGAACAAT 
CTGGCAAATC TGCAAAGCGA TCGAAACGAC TACGAATCAG CGTTAAAGGG ATATCAGGAG 
GCGTTGGAGA TATACCGGGA GCTGGCCCGT ACGAATCAGG CAACGTACCT GCCGTATGTT 
GCGACGACGC TGAACAATCT GGCCGTTCTG CAAAGGGGTA TAAACGACTA CGAATCAGCG 
TTAAAGGGAT ATCAGGAGGC GTTGGAGATC AGGCGGGAGC TGGCCCGTAC GAATCGGGCA 
ACGTACCTGC CGGATGTTGC GACGACGCTG AACAATCTGG CAAATCTGCA AAGGGGTATA 
AACGACTACG AATCAGCGTT AAAGGGATAT CAGGAGGCGT TGGAGATATA CCGGGAGCTG 
GCCCGTACGA ATCGGGCAAC GTACCTGCCG GATGTTGCGA TGACGCTGAA CAATATGGCC 
GTTCTGCAAA GCGATCGAAA CGACTACGAA TCAGCGTTAA AGGGATATCA GGAGGCGTTG 
GAGATCAGGC GGGAGCTGGC CCGTACGAAT CGGGCAACGT ACCTGCCGGA TGTTGCGACG 
ACGCTGAACA ATCTGGCAAA TCTGCAAAGG GGTATAAACG ACTACGAATC AGCGTTAAAG 
GGATATCAGG AGGCGTTGGA GATCAGGCGG GAGCTGGCCC GTACGAATCA GGCAACGTAC 
CTGCCGTATG TTGCGACGAC GCTGAACAAT CTGGCTGTTC TGCAAAGGGG TATAAACGAC 
TACGAATCAG CGTTAAAGGG ATATCAGGAG GCGTTGGAGA TCAGGCGGGA GCTGGCCCGT 
ACGAATCGGG CAACGTACCT GCCGGATGTT GCGACGACGC TGAACAATCT GGCCGTTCTG 
CAAAGGGGTA TAAACGACTA CGAATCAGCG TTAAAGGGAT ATCAGGAGGC GTTGGAGATC 
AGGCGGGAGC TGGCCCGTAC GAATCGGGCA ACGTACCTGC CGGATGTTGC GACGACGCTG 
AACAATCTGG CCGTTCTGCA AAGCGATCGA AACGACTACG AATCAGCGTT AAAGGGATAT 
CAGGAGGCGT TGGAGATATA CCGGGAGCTG GCCCGTACGA ATCAGGCAAC GTACCTGCCG 
GATGTTGCTT TGACCTCTAT CAATCTGGGG ATTTTTTATC AAGAGTTACT TCCTAATTGC 
GATAAATCTC TGGAATACAC AAAAGACGCA CTGCGTATTG TTCTGCCGCT CGAGAAGAAA 
ATACCTTATC TACGACGCTA TGTGGATATA GCGATCGCTG TTGTTCGGAA TTGGGATCTT 
GACCCTGAGG TGTTTGTTCA GGTTTTATAA 

 

Protein sequence

MNWKWNHIRI KGDNNLVLQD ADGNTTAIAI TAFIEQFTKE KDDRIRLLDG WLSDKEKIER 
FAEAERIRLQ KELLILQEEK VALEEQVKTL LQEFSDKDIT ATDSLYQNAF ALFMDGKVDD 
ALGVLDEVIF EAREKQLQEE RTKQAETRIL KAELLQMKFD FKGASEQYDR ALAIDASWGI 
HMKTAAFHWF LNDFSKAYTF YRQALALADT SAEKAMTLNN LANLQSDRND YESALKGYQE 
ALEIYRELAR TNQATYLPYV ATTLNNLAVL QRGINDYESA LKGYQEALEI RRELARTNRA 
TYLPDVATTL NNLANLQRGI NDYESALKGY QEALEIYREL ARTNRATYLP DVAMTLNNMA 
VLQSDRNDYE SALKGYQEAL EIRRELARTN RATYLPDVAT TLNNLANLQR GINDYESALK 
GYQEALEIRR ELARTNQATY LPYVATTLNN LAVLQRGIND YESALKGYQE ALEIRRELAR 
TNRATYLPDV ATTLNNLAVL QRGINDYESA LKGYQEALEI RRELARTNRA TYLPDVATTL 
NNLAVLQSDR NDYESALKGY QEALEIYREL ARTNQATYLP DVALTSINLG IFYQELLPNC 
DKSLEYTKDA LRIVLPLEKK IPYLRRYVDI AIAVVRNWDL DPEVFVQVL