| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2387 |
|---|
| Symbol | |
|---|
| ID | 6459080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011061 |
|---|
| Strand | - |
|---|
| Start bp | 45728 |
|---|
| End bp | 46741 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642729117 |
|---|
| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
|---|
| Protein accession | YP_002019731 |
|---|
| Protein GI | 194335165 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0908163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGG TCGGGTTGCT GTTTGAACGG GTGGTTGCTT TCGAAAATTT GCTCCATGCC
ACCCGGCAAG CCGCCAGGGG CAAAAAGTCG CAATTGCGAG TGGCCCACTT TTTGTTTCAT
CAGGAGAAGG AATGCTTGCG CCTGCAAACT GAATTGAAAC AAGGTATTTG GCAGCCCAGT
GGCTTTCGCG TATTTGAAAT CCGCGAACCC AAGCCCCGCC GTATCAGTGC GGCGGATTTT
CAGGATCGGG TGGTTCAACA TGCGCTATGC AATATACTGG GGCCTTTGTG CGAAAGGCGT
TTGATTTTTG ACACTTGGGC CTGTCGGCGT GGCAAGGGTT CCCATTTGGC GATGAAACGG
GCACAGGCGT TTTCACGACG CTTTCCTTAT TTTTTAAAGT GTGATATTCG ACGTTATTTC
GACAGTGTGG ATCATACCAT CCTCAAACGA TTGCTGTGGC GGCTGATCAA GGATAAGCCG
GTTCTGAATT TACTGGATCG AATTATCGAC CACCCCTTGC CGGGCGCGTT GCCCGGTAAA
GGCTTGCCCA TCGGCAACCT GACCAGTCAG CATTTCGCCA ATCTTTATCT GGGTGAACTT
GATCATCAAC TTAAGGATCG AATGGGGGTT AAAGCCTATT TACGCTATAT GGACGATATG
CTGATTTTTG CAGATGATAA ATCCCGGCTA CATGAACTTG TCACTGGTAT TGAGGATTTT
GTAAAGCAGC ATTTGCAGTT GTCATTGAGG CCTTCCGCCA CGCTGGTTGC ACCAGTGAGC
GAAGGCGTTC CCTTTTTGGG ATTTAGGATT TTCCCGGGTT TGGTCCGCGT GAACGGGCAG
GCGCTGCGTC GCTTCAGGCA TCGCTTGCGC CTGCATGAAA AGGCGTATCA GACCGGGAAG
ATGGATGTGG AGTCTTTGAC AGCATCCGTA CAGAGCATGA TTGCGCATTT GCAACATGCC
GATACGCACC GGTTACGGCA ATCTCTGTTG TCGTCATCCT GTGCTTTGGG CTGA
|
|---|
| Protein sequence | MKRVGLLFER VVAFENLLHA TRQAARGKKS QLRVAHFLFH QEKECLRLQT ELKQGIWQPS
GFRVFEIREP KPRRISAADF QDRVVQHALC NILGPLCERR LIFDTWACRR GKGSHLAMKR
AQAFSRRFPY FLKCDIRRYF DSVDHTILKR LLWRLIKDKP VLNLLDRIID HPLPGALPGK
GLPIGNLTSQ HFANLYLGEL DHQLKDRMGV KAYLRYMDDM LIFADDKSRL HELVTGIEDF
VKQHLQLSLR PSATLVAPVS EGVPFLGFRI FPGLVRVNGQ ALRRFRHRLR LHEKAYQTGK
MDVESLTASV QSMIAHLQHA DTHRLRQSLL SSSCALG
|
|---|
| |