Gene Paes_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2312 
Symbol 
ID6459437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2487039 
End bp2487887 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content53% 
IMG OID642726283 
ProductIntegrase catalytic region 
Protein accessionYP_002016955 
Protein GI194335095 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.939374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAACGC CCGAGGCGAA GCGCAATGCC GTCAAGCATT TGCACGATAC CTTCGGGCAA 
AGTCTGAGAA AGCTCTGTAT CTTGATCGGG CTGAACCGTT CAAGCTGGTA TTACGAGCCT
CAACCGGATA GCAACGAACC AATCAGGAAG CGGTTACGGG AATTGGCCGA TGAGCGCAAA
CGCTGGGGGT ACCGGCGATT GCATTACCTG TTGCGTCGAG AAGGATTTCA GATCAACCAC
AAACGGACAG AACGGCTGTA CCGGGAAGAA AACCTGATGC TGCGGGTCAG AAGGCGCAGG
AAGATGGCCT CAGAGAACCG TGTTGCCCCG CCACCACCGG AGCGGAAGAA CCACTGCTGG
GCGATGGATT TTATGAGCGA CAATCTGTAT AACGGCCGTC GTTTTCGGGT ACTCAACGTG
CTGGACAGCT ACAGCAGGGA TTATCTCGGT TTTGAAGTCG ATACCTCAAT CAATGGCAAG
CGAGTATGCA GTGTTCTCGA ACGGATTGCC TGGTTCAAAG GCTTGCCGGA ACTGATCACG
GTGGACAATG GCCCAGAATT CATCGGTAAG GCACTGGATG CCTGGGCACA TCGGCATGGA
GTGAAGCTGG TGTTCAATCG ACCGGGCAAG CCGGTTGACA ACACCTATAT CGAAAGCTTT
AACGGCAGGC TGCGGGATGA ATGCCTGAAC GTAAACTGGT TTATGAGTCT GGGGCATGCA
CGAGAGGTTA TCGCAGAATG GCAGGAGGAT TACAATTCGG TCCGTCCGCA CAGCTCATTG
GGAACGCGGA CACCCGAAGA ATTTCTGGTT CAGCAAACTG AATTTTGCCA AAAAGAAGTG
GTCTATTGA
 
Protein sequence
MVTPEAKRNA VKHLHDTFGQ SLRKLCILIG LNRSSWYYEP QPDSNEPIRK RLRELADERK 
RWGYRRLHYL LRREGFQINH KRTERLYREE NLMLRVRRRR KMASENRVAP PPPERKNHCW
AMDFMSDNLY NGRRFRVLNV LDSYSRDYLG FEVDTSINGK RVCSVLERIA WFKGLPELIT
VDNGPEFIGK ALDAWAHRHG VKLVFNRPGK PVDNTYIESF NGRLRDECLN VNWFMSLGHA
REVIAEWQED YNSVRPHSSL GTRTPEEFLV QQTEFCQKEV VY