Gene Paes_2293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2293 
Symbol 
ID6459497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2470168 
End bp2472225 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content53% 
IMG OID642726268 
ProductTonB-dependent receptor 
Protein accessionYP_002016940 
Protein GI194335080 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGCGG TTATTGGTTT TTCAGTCTTC CAGGAATCGA ATGCTCAGGA GCTTCCTGCT 
GAAACACCGT CTTCGGCAAC TGTTCCATTG AGGGAATTTC AGTTTGAAAC CATCGTTGTT
ACTGCAGATG CCATCGATGA TGAGCAGCAG GAGATCGAGA GTGGCGAACT GAGAACGCAC
AAGGTGGTCG ACCTTGCTGA GATTCTTTCC GACGAGTTGG TGGAGGTTCA GATGATCCGC
AAAAGCGGGT ACGGCAACGA GGTGTCTGTG CGAGGCTTTG GCCAGGAGAA TATCAAGGTT
CTGCTGGACG GGGGGATTCT CGAAGGGGCC TGCGGCAGCC GCAAGGACCC TTCGCTTTCG
CACATCAATA TGCTGACTGT GCAGAAACTG ACGGTTCAGC AGGGTCCGTT TGACGTTACA
AAACCTGGCT GCCTGGGGGG CTACATTGAC GTGGTCACCA GGAAACCCGA GGAAGGGTTT
CATGGGGAGT TGCTGGGCAA GGTCGGCAGT TACGGTTTCC ATAGCGGAGG TTTTACAACT
ACCGGCGGCA GTGACAAGGT CCAGTGGCTT TTCGGGTACA ATTATTCCGA ATCAGGACAG
TACGAGGATG GAGACGGCAG CAGGCTCTGG AGCGTCCGAG AGGGCCTGGG GGCTTCCTAC
AGCGAAGAGG GGCGTGAGGC TCAGTCGTTT CAGAAGCACG ATGTCTGGGG TAAACTGCAG
TTCACGCCGA ATGAGAACAG CACCATTCTG CTGGAGCATT CCTACGGTAA GGCGAATGAT
ATTCTGACAC CGCGGGTTGT CTTCGATACC GAGGAGGAGC TGACCAATCT CTCAAAGGCG
AGCTGGGAGA TCCGCAATCT CGGCAAGCTT TCCGAGACGC TCACCTTGTC TGTCTATCGC
AACGAGGTGG ATCACGCTCC TTTCCAGGAG TATCGCAATG TAGCCGTACC GAAAAACAAT
GAGGTCGAGT CGGTGATTAG CGGTGGAGCC GTTCAAAACG TGACAGAGAC GGATTTTGCA
ACATTGACCT ACGGCATCGA CTGGTATCAC CGGGAGTGGT GGGGAGACGT CTATTACAGC
CTGACAGGTC AGAAGATCAA TGATGTTCTC ATCCCTTCAG TCCGGTCGCT CAATCTGGGC
GGGTATGTCA AGATGGATAA AACGTTCGAC AGGCTGTCGC TGGGTTTGGG GTTGAGGTAC
GATCGTTTCC GCCAGGAGGC GGATGAAGAG CTGAAATTTA CGAGCGCTGT GACCGACAAC
AATCGTAACG TTGATCATCT TTTCGGCGGA CATCTGTCGT TCAGATATGT CCTGGGTGAT
GAGGCGATGC TTTTCGGCGG TGTTGGCCGC AGTTACCGGA CGCCGACATC GAGTGAACGA
TATATCCAGG GCAATCCGGG ATTTTTCGGC AATCCGGATC TCAAGCCTAC GGCCAACACG
GAGTTCGACG TGGGTGTTTT GTACGAGTTC GGAGGGGTGA AGTTCCAGAC AAAGGGATTT
TATTCCTCTC TTGACGATTA CATCTACCAG GAAAACAATG TTGCAGGGTA TAAGAGCTAT
ACGAACATCG ATGCCCATAT CTGGGGCGGT GACATCAAGG CCATTGTCGA TCTGAGTGAC
GGGTTTTCAC TGGAAGGCGG AATCGCCTAT CAGAAAGGCG TCAAGGAGAG CTTCCCCGAC
AACAACAGCG ACGATGATCT GGGCCAGATG GCTCCTTTGA AGGGGATGCT GGCGCTGAAT
TACAACAGCC ACGAAACATT GAGGGAACAC GATCGAGGCC TCTTCGGCTC TATAGAGTGG
GTTCATTCGA GTGCCTCGAA GCACGTCGAT GCCGATGCCG GAGAAAAGCC GCTTGAAGCG
TGGGATATCA TCAACCTGCG CATGGGGTAC CGGTATAAAT CATACAGTTT GAATGTTGGC
ATGGATAACC TTTTTGATAC ACAGTATACG GTTGCGAATT CTTATGAATG GGATGTCATC
GGCGGAACCG GAGCCAATCC GGCAATCGTC AGCGAACCGG GCAGGTTCAT CTACGCTACT
GTCGGCTATG CCTGGTAG
 
Protein sequence
MLAVIGFSVF QESNAQELPA ETPSSATVPL REFQFETIVV TADAIDDEQQ EIESGELRTH 
KVVDLAEILS DELVEVQMIR KSGYGNEVSV RGFGQENIKV LLDGGILEGA CGSRKDPSLS
HINMLTVQKL TVQQGPFDVT KPGCLGGYID VVTRKPEEGF HGELLGKVGS YGFHSGGFTT
TGGSDKVQWL FGYNYSESGQ YEDGDGSRLW SVREGLGASY SEEGREAQSF QKHDVWGKLQ
FTPNENSTIL LEHSYGKAND ILTPRVVFDT EEELTNLSKA SWEIRNLGKL SETLTLSVYR
NEVDHAPFQE YRNVAVPKNN EVESVISGGA VQNVTETDFA TLTYGIDWYH REWWGDVYYS
LTGQKINDVL IPSVRSLNLG GYVKMDKTFD RLSLGLGLRY DRFRQEADEE LKFTSAVTDN
NRNVDHLFGG HLSFRYVLGD EAMLFGGVGR SYRTPTSSER YIQGNPGFFG NPDLKPTANT
EFDVGVLYEF GGVKFQTKGF YSSLDDYIYQ ENNVAGYKSY TNIDAHIWGG DIKAIVDLSD
GFSLEGGIAY QKGVKESFPD NNSDDDLGQM APLKGMLALN YNSHETLREH DRGLFGSIEW
VHSSASKHVD ADAGEKPLEA WDIINLRMGY RYKSYSLNVG MDNLFDTQYT VANSYEWDVI
GGTGANPAIV SEPGRFIYAT VGYAW