Gene Paes_2268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2268 
Symbol 
ID6459557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2447357 
End bp2448856 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content55% 
IMG OID642726244 
ProductUDP-N-acetylmuramyl-tripeptide synthetase 
Protein accessionYP_002016916 
Protein GI194335056 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGT TGGAAGATCT TATCGGATTG CTTGATCCGC TCGAATATCT TGCCGGCAGA 
ACCCCGCTGA AAGAGGTTCA TGCCCTGACT GCGGACTCGC GTCAGGCTGT TGAAGGAGGA
GCGTATTTTG CCCTTCGGGG GTATGTCACC GACGGGCACC ACTTTATTTC GGACGCTCTT
TCGAAAGGGG TCGGGGTTGT TGTATGCGAG GAAATTCCTG TATCAGTCGA TGAGCGATGC
TGCTATATCA GGGTTGCTGA CTGCCGGACT GCATTGGCGG CTGCTGCGGC TGAATGGTTT
GGGCACCCTG CATCTTCTCT CCGGGTTATC GGTGTGACGG GGACAAACGG AAAAACGACG
ACTGCCCGAC TGATCAGGAC TATGCTCGAC AGGTCAGGCG TAAAGACTGG TTATATCGGC
ACCGGACAGG CTCTTATCGG GGACGAATCG ATCGTTCTGG AGCGCACGAC CCCGGAAGCG
ATGGATCTTC ATGCGCTCTT CAGGAAAATG GTCAATTGCG GTTGCGAGGC GGTTGTTATG
GAGGTATCTT CTCATGCGCT TGTGCTGCAT CGAACAGAAG GGATTTCTTT CTACGGAGCG
GTTTTTACCA ATCTGACACC GGAGCACCTT GATTTTCACG CAACGATGGA CGAGTATGGC
AGTGCCAAGC AGATCCTGTT CCGGCAGGTT GCGCCGGACG GGTTCGGTAT CGTCAATGCC
GATGATGCAT GGGGCTCTAT GATGGCAGGG GCATTCAGCG GATCCAGGTT ATTCTGCTGT
ACGGTTGGTT CTCAGGTTTT CGGCTGCACG AACGGTTCGG TTGTTCGGGC TCGCGATATC
GAAGCCCGGA TGGATGGCAG TTCTGTCACG GTACAGATGA ATGGGCGGGC ATGTCGCGCG
TCGTTTCTGC TGCCGGGGTT ATTCAATGTC ATGAACATGC TCGAAATCCT GTCGGCAGGA
GTTGCTATGG GTCTCTCTCT TGAAACGGCG GCAGCGTCTG TTGCCGATGT TGTTTCGGTT
GAAGGGCGTA TGGAGCCTGT CAGCGATGAT GGCGGTTTGT TTTCCGCAAT CGTGGATTAC
GCTCATACGC CGGATGCCCT TGAAAAAGTG ATCGGGGCCC TCAACGAGGT GCGTCCGGCA
GATTCTTCGC TGATTGTGGT TTTCGGATGC GGCGGGGATC GCGATCGCTC GAAGCGCCCC
TTGATGGGCG GGATTGCCGC GGCCGGGGCG GATCATGTCA TTCTCACGTC GGATAATCCA
AGAAGCGAGG ATCCTGAAGA GATTTTGGAT GCGATTGCTT CCGGAATCAC CGAAGGCAGC
TTCATGCGTA TTGCCGACAG GGCCGATGCT ATTGTTTGCG GGGTTCAGAT GCTTCGTCCG
GGAGATCTTC TGCTGATAGC GGGTAAAGGC CATGAGTGTT ATCAGGAGAG CGGAGGTCGG
AAGAGCTATT TCTCCGATCG TGAGGTCGTT GCACGAGCGC TTCAGGAGCG CGCTGATTGA
 
Protein sequence
MMTLEDLIGL LDPLEYLAGR TPLKEVHALT ADSRQAVEGG AYFALRGYVT DGHHFISDAL 
SKGVGVVVCE EIPVSVDERC CYIRVADCRT ALAAAAAEWF GHPASSLRVI GVTGTNGKTT
TARLIRTMLD RSGVKTGYIG TGQALIGDES IVLERTTPEA MDLHALFRKM VNCGCEAVVM
EVSSHALVLH RTEGISFYGA VFTNLTPEHL DFHATMDEYG SAKQILFRQV APDGFGIVNA
DDAWGSMMAG AFSGSRLFCC TVGSQVFGCT NGSVVRARDI EARMDGSSVT VQMNGRACRA
SFLLPGLFNV MNMLEILSAG VAMGLSLETA AASVADVVSV EGRMEPVSDD GGLFSAIVDY
AHTPDALEKV IGALNEVRPA DSSLIVVFGC GGDRDRSKRP LMGGIAAAGA DHVILTSDNP
RSEDPEEILD AIASGITEGS FMRIADRADA IVCGVQMLRP GDLLLIAGKG HECYQESGGR
KSYFSDREVV ARALQERAD