| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2267 |
|---|
| Symbol | |
|---|
| ID | 6459565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 2445772 |
|---|
| End bp | 2447178 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642726243 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
|---|
| Protein accession | YP_002016915 |
|---|
| Protein GI | 194335055 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATGT GTTTGACAAA GGATGATCTT GAATCGGTTG GCACTCCTGC CGGCTTTGCT
CTGGGTGAAG CGGTGGAGTG GTGTGATCCA TCTGTTTCAA TCGATTCAAG AGATATCAGG
AGCGGCAGTA TTTTCTTTGC TCTGAAGGGA GAGCGGACAG ATGGTCATGA GTATGTCTCC
CTCGCGTTCA AAAGCGGGGC GCGTTGTGCT GTGGTCAACA GGGAGTGGTA CAGCAGGCAT
GCTGAATCCG TTCATCAGGA GGGTTGGCGA TATCTTGTGG TGCACGATAC CGTTCGGGCC
CTGCAGCAGC TTGCCTCGAT CTATCGGAGC AAGTTCAGCA TTCCTGTTAT CGGTATCGGC
GGCAGTAATG GTAAAACGAC AACCAAGGAG ATGACCGCAG CCGTTCTCGG GACGACATAC
AAGGTGCATA TGAGCAAGGG AAATCTCAAT AACCATCTCG GTGTGCCGCT CACGCTTTTC
GGTTTACGCG ATACCCATGA TCTTGCGGTT GTCGAAATGG GAATCAATCA TCCCGGAGAG
ATGGAACTGC TCACCTCCAT TGCCCGTCCC GACTTCGCTC TCCTGACAAA TATCGGTCAT
GAACATCTCG AGTTTCTTGG CGATCTGGAT GGAGTGGCTG AGGCTGAGAC GGTGCTTTAC
CATGATACCA TCATGCGTGG CGGAACGGTT TTTGTCAATA CCGGCGACGC ACGGCTTCTT
GCTGCGGCTC GCGAGATCCA AAATCGTGTT GACTACGGTC CTGAGCGGGA CGGGAACCTG
ATCTGGCCGG AGAAGATTGT GCTTGATCCC GCTGGCAGGA CGACCTTTAC TCTTTGCACT
GCTTCCGGAA GCGTCAGCCT GATGCTTCAT TTTTCCGGAC GTCACAATGT TGATAACGCC
GTTGCTGCCG CTGCTGTCGG GAGCTGTTTC AATGTTCCTC TGAACGCTAT CGCAGAAGGT
CTCGGGTCGC TTGTGCCTGC CGATGGGTGG AAACGGCTTG AGTTTATTGA GGCTGGCGGG
ATAAGGATTT TCAACGATAC CTATAACGCC AATCCCGATT CGGTTACGAT GGCGCTGAAA
ACCGTTTGCG AGATCCCCTG TTCCGGCCGT AGGGTCCTGG TCTTTGCCGA TATGCTTGAA
CTTGGAGAGG TTTCAGATGC CGAGCACCGC CGGATGGGAG CGCTTGTTGC TCAGTTGCCG
TTCGACGCTG TCTATACCTA TGGAGAGCAT GCGGCATTGA GCTGTCTCTC TGCCGGACCG
AAGTGCAGGG GTCATTATAC CAGTCACGCG CATTTGCTCG ATGCACTGAA GGCGTATCTC
TCTCAGGACG ACCTTCTCCT TCTTAAAGGG TCGAGAGGGA TGAGGCTCGA ACTGATAGCT
GAAGGCCTTC GAGCCACCGA CAAGTAG
|
|---|
| Protein sequence | MGMCLTKDDL ESVGTPAGFA LGEAVEWCDP SVSIDSRDIR SGSIFFALKG ERTDGHEYVS
LAFKSGARCA VVNREWYSRH AESVHQEGWR YLVVHDTVRA LQQLASIYRS KFSIPVIGIG
GSNGKTTTKE MTAAVLGTTY KVHMSKGNLN NHLGVPLTLF GLRDTHDLAV VEMGINHPGE
MELLTSIARP DFALLTNIGH EHLEFLGDLD GVAEAETVLY HDTIMRGGTV FVNTGDARLL
AAAREIQNRV DYGPERDGNL IWPEKIVLDP AGRTTFTLCT ASGSVSLMLH FSGRHNVDNA
VAAAAVGSCF NVPLNAIAEG LGSLVPADGW KRLEFIEAGG IRIFNDTYNA NPDSVTMALK
TVCEIPCSGR RVLVFADMLE LGEVSDAEHR RMGALVAQLP FDAVYTYGEH AALSCLSAGP
KCRGHYTSHA HLLDALKAYL SQDDLLLLKG SRGMRLELIA EGLRATDK
|
|---|
| |