Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2255 |
Symbol | |
ID | 6459602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2432157 |
End bp | 2433911 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642726231 |
Product | succinate dehydrogenase, flavoprotein subunit |
Protein accession | YP_002016903 |
Protein GI | 194335043 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.794625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGTTG TTTATCATGA TGTGATCATT GTCGGCGCAG GGCTTGCCGG CCTGCGTGCA GCGGTGGAAC TTGCAGGATC AGCCGATGTG GCGGTGCTAT CCAAGCTGCA CCCCCTTCGT TCTCATTCCG GTGCTGCTCA GGGAGGGATA TCTGCAGCTC TCGGAAATGT TGAAGAGGAT AACCCTGACT GGCATGCCTA TGATACGATC AAGGGTTCGG ATTATCTTGC TGATCAGTAT GCTGTCCAGG TGATGTGCAA TGACGCTCCG AGAGCGATTA TCGAGATGGA GCATCTGGGA GTTCCTTTTT CCCGTCTCGA TGACGGGCGT ATAGCCCAGC GTCCATTTGG CGGCCATACC CGGAATTTCG GTCAGGCGCC TGTTCGCAGG ACCTGTTTTG CTGCGGATCG AACAGGACAT GTCTGCCTGC ATACGCTCTA CGAGCAGTCG CTCAAGCAGG GCGTTAGGTT TTATGATGAA ATTCAGGTGC TCGATCTGTG TATGGAGGAT GGCTCGGTTA ACGGTGTCGT TGCCATGGAG CTTCTGACCG GCCGCATAGT GCTCATGCAT GCAAAAGCGG TGATGTTTGC GACCGGAGGT TATGGTAAGG CATGGAAGAC GACCTCGAAC GCTTTTGCCA ATACCGGTGA TGGTTTGGGG ATCGTGCTTC GTAACGGTCT TCCTCTTCAG GATATGGAGT TTGTCCAGTT TCATCCGACA GGACTCTATC AGTTGGGGAT TCTTATTACC GAGGCGGCAA GAGGAGAGGG CGGCATATTG CTCAACGGCA ACGGAGAGCG GTTTATGGAA CGCTATGCAC CCAGTATCAA GGACCTTGCT CCGCGAGATA TTGTAAGTCG GAGTATTTAT GATGAGCTGA AAGCCGGCAG GGGCGCTGGT CCCGAAAAAG ATCATGTGCT GTTGGACCTG ACATCGCTTT CGCATGAGAA AATCGCAAGC CGTCTGCCCG AGATCGAGTC TTTTGCGAAA GTCTATCTGG GCATCGATCC TTCACGAGCG CCTATTCCTG TACTTCCTAC CTGCCACTAT GCCATGGGCG GCATTCCCAC CTCGGTGGAT GGTCGCGTTC TCGGCGATGC TGAGGGTCGT GAGGTTCCGG GTTTCTGGGC GGCAGGAGAG GTCGCCTGTG TTTCGGTGCA TGGCGCCAAT CGTCTCGGAT CAAACTCTCT TCTGGATCTT ATTGTGTTTG GCCGGCGCAG CGGAAAGGAT ATTGCTCAAT TCCTGAAGAA GAGCGGGCCG GCGTTGCCTC TCGACATGCA TGCCGCTGAT CGCGTCAAGG GGGTTATCAG CACGCTTCTG GATCGTCAGA GCGGTGAATC CGTTGCCGCA GTGCGCCGTG ATCTTCAGCG GGTTATGATG GATGACGTAT CGGTGTTCCG CCAGGAGTCA TGCCTGGCCG ATGCGGTCAG CAAGCTGCGC GAACTGCAGC AGCGGGCATC GTTGATCCGG GTCAGGGACA GGACAAGAAA TTTCAACCAG GAGCTTACCG ACGCTCTTGA GCTGCAGCAC ATGGTCAATT ATTCTCTGAC GGTTGCGCTT TCAGCGCTCA ATCGTCGTGA ATCGCGGGGC GCGCACAGCA GGGAGGATTA TCCCGACCGG GACGACGCCA ATTGGCTGAA GCATTCAATG TGCCGTATGG ATGAAGAGGG TGGCGTGCAG CTTTTTGATA GGCCTGTCGA TCTCTCATTA GCGGCGGCAA ATCCTGTGTT TGTTCCGAAA GAAAGAAAGT ACTGA
|
Protein sequence | MDVVYHDVII VGAGLAGLRA AVELAGSADV AVLSKLHPLR SHSGAAQGGI SAALGNVEED NPDWHAYDTI KGSDYLADQY AVQVMCNDAP RAIIEMEHLG VPFSRLDDGR IAQRPFGGHT RNFGQAPVRR TCFAADRTGH VCLHTLYEQS LKQGVRFYDE IQVLDLCMED GSVNGVVAME LLTGRIVLMH AKAVMFATGG YGKAWKTTSN AFANTGDGLG IVLRNGLPLQ DMEFVQFHPT GLYQLGILIT EAARGEGGIL LNGNGERFME RYAPSIKDLA PRDIVSRSIY DELKAGRGAG PEKDHVLLDL TSLSHEKIAS RLPEIESFAK VYLGIDPSRA PIPVLPTCHY AMGGIPTSVD GRVLGDAEGR EVPGFWAAGE VACVSVHGAN RLGSNSLLDL IVFGRRSGKD IAQFLKKSGP ALPLDMHAAD RVKGVISTLL DRQSGESVAA VRRDLQRVMM DDVSVFRQES CLADAVSKLR ELQQRASLIR VRDRTRNFNQ ELTDALELQH MVNYSLTVAL SALNRRESRG AHSREDYPDR DDANWLKHSM CRMDEEGGVQ LFDRPVDLSL AAANPVFVPK ERKY
|
| |