Gene Paes_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2178 
Symbol 
ID6460352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2351739 
End bp2352320 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content51% 
IMG OID642726154 
ProductNLP/P60 protein 
Protein accessionYP_002016827 
Protein GI194334967 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGG CTGAATCACT CTCTCACAAA TCCATGTTGC GCTCTACACT TCTGCATGCT 
CCGAACATAC TGCGGGGCGC GCTTCTGATC CTGATCGCAC TCCTGTACGG CTGCGCAAGC
AGTTACTCCT CTCAAGGCGT TCAATATAGC GCAAAAAACA GAAAAAGTGA TACCTATAGC
CCGTTGCCCC TTATAGCGAC AGAGGCGCGA CTGATCGATA TGCTTGAAAA CGTTACAGGA
CTTGTCGGAA CACAATACCG CTACGGAGGA GACAGCGAAA AAGCCTTTGA CTGCTCGGGT
TTTGTGCAGC ATATTTACCG CAACACCTTC AATGCGAAAA TCCCCCGGAC AGCGCGCCGC
CAGTCTGAAT TCGGCGAAAA AATTTCACGC GGAGGGCTTC AGCGCGGCGA TCTGGTTTTT
TTCAGGCTCA ATGGAGGCGC TATCGACCAT GTCGGCATCT ATATCGATAA CGGCCTGTTC
GTCCATGCTT CATCGAGCAG GGGCGTCACC CTTGGAAACC TCGACAAACC TTACTACAAC
AAACGCTTTG CAAGGGCAAT ACGACTACTG CAGATACGCT GA
 
Protein sequence
MMQAESLSHK SMLRSTLLHA PNILRGALLI LIALLYGCAS SYSSQGVQYS AKNRKSDTYS 
PLPLIATEAR LIDMLENVTG LVGTQYRYGG DSEKAFDCSG FVQHIYRNTF NAKIPRTARR
QSEFGEKISR GGLQRGDLVF FRLNGGAIDH VGIYIDNGLF VHASSSRGVT LGNLDKPYYN
KRFARAIRLL QIR