Gene Paes_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2164 
Symbol 
ID6458598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2338455 
End bp2339321 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content52% 
IMG OID642726140 
ProductPrephenate dehydrogenase 
Protein accessionYP_002016813 
Protein GI194334953 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.854541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCAC CCTGTATCAG CCGTATATCA ATTATAGGGC TCGGACTGAT CGGAGCATCC 
TTGCTGCAGG CCCTGAAGCG CTCCCCGCTC GCCGGAGAGC AGCAGATCGT CTTCAAAGGG
TTCGACCCGG GATTCTCCAG TCAGGATATT CTGAGGATCA AAGAGCTGGG CCTTGACTCT
TTTGAGACGG ATAAAACCAG CCTCTATGAT ACCGACCTGA TTATCCTGGC AGCTCCGGTT
CACACCAATA TCAGCCTGCT CGAAGAGATC GGAAGACTCG CTCCGCAGTC TGTTCTGGTC
AGCGATGTCT CCAGTACGAA AGAAGCTATT GCACAAAGAG CCTCGTCACT CGGGATCGAT
TTTGTCGGCA TGCACCCGAT CGCAGGCCGG GAACAGCAGG GCTACCAGGC CAGTCACGAA
ACCCTTCTTG AAGATAAAAC CCTCGTGCTT TGCGCCACCG CTGAAATGAT GGAACGTCAA
CGGGTAAAAA ACCTCATAGA ACTGCTGATC TCGGCTCGAT GCAAAGTTTT GGCTATGACT
CCCCATGAGC ATGACAGGAC AGTGGCAAGC ATCAGTCACC TGCCACAACT GCTCTCAACG
GCCCTGATCA ATCATTGCCG TGATGATATT GAAAAAGCCG GTCCGGGATT CGCGACACTG
ACAAGACTTG CCGGAAGCCC ATGGCATATC TGGCAGGACA TTATAGAAAC CAACAGTGCC
AACATCGCCG CCGAACTGCG TGCATTCTGC GATGAAATAG CGCTACTGGC TGATGATGTG
CAGCACAACC GCACGGAAAA GCTGAAATTG CGGTTTGACA GCGCAAACGA CCTTTACACT
GTCCTCAACA GGAGAAAAAC CCAATGA
 
Protein sequence
MPSPCISRIS IIGLGLIGAS LLQALKRSPL AGEQQIVFKG FDPGFSSQDI LRIKELGLDS 
FETDKTSLYD TDLIILAAPV HTNISLLEEI GRLAPQSVLV SDVSSTKEAI AQRASSLGID
FVGMHPIAGR EQQGYQASHE TLLEDKTLVL CATAEMMERQ RVKNLIELLI SARCKVLAMT
PHEHDRTVAS ISHLPQLLST ALINHCRDDI EKAGPGFATL TRLAGSPWHI WQDIIETNSA
NIAAELRAFC DEIALLADDV QHNRTEKLKL RFDSANDLYT VLNRRKTQ