Gene Paes_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2141 
Symbol 
ID6458385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2318227 
End bp2319219 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content54% 
IMG OID642726119 
ProductPolysulphide reductase NrfD 
Protein accessionYP_002016792 
Protein GI194334932 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3301] Formate-dependent nitrite reductase, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0724041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.879505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA CGATGACAGA AATCATATCC ACGAAAATGA ACCCGAATGT GATCCCGCAT 
CTCCACATTT GGGAATGGCA TATCCCGCTC TACCTCTTTC TTGGTGGTTT AGCAGGAGGG
CTTCTGGTCA TTACCTCGAT CATGATCGTC CTGAAACGGA AGTTTGGTAT CGGCCCGAAA
GACGAGGGAA ACGGTTGCCC GTGCCTTGCT GTCAGAATCG GCTCTATCCT GTCCCCGGTA
CTGCTTGGCA TCGGCATGCT CTTCCTCTTC CTCGATCTTG CCCATCCGCT CTATGTGTGG
GCGTTCTATA CAACCATACA GCCAACATCG CCAATGTCGG CCGGCAGCTG GATCCTGATC
GCATTCTTCC CGCTCGCCGT CCTTCAGGCC ATGCTGGTCA ACAAGAAGTT TCTGCGTGAT
CGCAACATCG GTATCATCAA CAAGCTGATC GACTGGACAG AAGACCATCT GACCATCGTC
GCGCTTGTCA ATGCGCATAT CGGCGTAGGC ATCGGTATCT ACACAGGAAT CCTGCTCTCG
TTCTTCTCGG CACGGCCGCT CTGGTCGAGT TCGATTCTCG GTATGCTCTT CCTGGTATCG
GGTATTTCCA GTGCTGCAGC ACTGATGCTG CTCCTTGCCC CCGACGATGA AAAACCTGTC
TACAGCATGG TCGACGCCAA CGCAATCTGG ATCGAACTGG TCGTTGTCGG ACTCTTCGTC
CTTGGCGGCG TCACCGGCCC GGCCAACAAC AGCGGCGCCA TGATGCACCT GATCGCAGGC
GACTACCAGA TGGCAGGCAT GACCTATATG CTCTGGTTCT GGGGAATCTT TGTTGCTCTC
GGCCTTGTCA TTCCGCTGCT TCTTGAGTTC CTCGAAGCTG CAGGCGTTCA CATTAAACTG
CCTCAGGTAG CACCGGTCCT CGTTCTGATC GGCGGTCTTG TCCTCCGGTT CCTGATCGTT
TTCGCCGGCC AGACCTACCA CACGTTTATG TAG
 
Protein sequence
MTETMTEIIS TKMNPNVIPH LHIWEWHIPL YLFLGGLAGG LLVITSIMIV LKRKFGIGPK 
DEGNGCPCLA VRIGSILSPV LLGIGMLFLF LDLAHPLYVW AFYTTIQPTS PMSAGSWILI
AFFPLAVLQA MLVNKKFLRD RNIGIINKLI DWTEDHLTIV ALVNAHIGVG IGIYTGILLS
FFSARPLWSS SILGMLFLVS GISSAAALML LLAPDDEKPV YSMVDANAIW IELVVVGLFV
LGGVTGPANN SGAMMHLIAG DYQMAGMTYM LWFWGIFVAL GLVIPLLLEF LEAAGVHIKL
PQVAPVLVLI GGLVLRFLIV FAGQTYHTFM