Gene Paes_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2132 
Symbol 
ID6459702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2308466 
End bp2308981 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content48% 
IMG OID642726110 
ProductUspA domain protein 
Protein accessionYP_002016783 
Protein GI194334923 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.182208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.874997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCC TTTGTGCCAT TGATTTTTCG GAATCAACCA TCGACCTTAT CAAATCAGCT 
GAAAAGCTGG GAACACATTG TAACGCAACC CTGGTTCTCG CCCATGTCAT GCCTCCTGAT
GAGAACGAAA TCGAATTTCA GCCGATAATC GAAGCCCATT TCAAGCCCCG CAAAAAATAT
TACACTGAAC CGGATTCAAC AGAAAAAGGG GACAGCGTAC CGATTCTTCA CAACAGGAAA
TACCAGCTGC TTCAGACGAT CACCGAATGG CTGAAAGAAA AAGGAATCTC ATCGGAAATC
TCGATCGTGC ATGGCAACGA GGTAGACGGC ATTATCGAAC AGGCTGCAAA ACACGAGACA
GACATGATCC TGCTGGGCTC TCACGGCCAT AAAGCGCTCT ATCAGCTGCT TATCGGATCG
GTCTGCGAAG GCGTCCTCAG AAAAGCAGCC ATTCCGGTCG TTATTGTCCC GAAGGGAAAC
ACAAAAAAGA ACGTAGCGCC TCCGGCACAG GATTAG
 
Protein sequence
MKLLCAIDFS ESTIDLIKSA EKLGTHCNAT LVLAHVMPPD ENEIEFQPII EAHFKPRKKY 
YTEPDSTEKG DSVPILHNRK YQLLQTITEW LKEKGISSEI SIVHGNEVDG IIEQAAKHET
DMILLGSHGH KALYQLLIGS VCEGVLRKAA IPVVIVPKGN TKKNVAPPAQ D