Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2132 |
Symbol | |
ID | 6459702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 2308466 |
End bp | 2308981 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642726110 |
Product | UspA domain protein |
Protein accession | YP_002016783 |
Protein GI | 194334923 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.182208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.874997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCC TTTGTGCCAT TGATTTTTCG GAATCAACCA TCGACCTTAT CAAATCAGCT GAAAAGCTGG GAACACATTG TAACGCAACC CTGGTTCTCG CCCATGTCAT GCCTCCTGAT GAGAACGAAA TCGAATTTCA GCCGATAATC GAAGCCCATT TCAAGCCCCG CAAAAAATAT TACACTGAAC CGGATTCAAC AGAAAAAGGG GACAGCGTAC CGATTCTTCA CAACAGGAAA TACCAGCTGC TTCAGACGAT CACCGAATGG CTGAAAGAAA AAGGAATCTC ATCGGAAATC TCGATCGTGC ATGGCAACGA GGTAGACGGC ATTATCGAAC AGGCTGCAAA ACACGAGACA GACATGATCC TGCTGGGCTC TCACGGCCAT AAAGCGCTCT ATCAGCTGCT TATCGGATCG GTCTGCGAAG GCGTCCTCAG AAAAGCAGCC ATTCCGGTCG TTATTGTCCC GAAGGGAAAC ACAAAAAAGA ACGTAGCGCC TCCGGCACAG GATTAG
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Protein sequence | MKLLCAIDFS ESTIDLIKSA EKLGTHCNAT LVLAHVMPPD ENEIEFQPII EAHFKPRKKY YTEPDSTEKG DSVPILHNRK YQLLQTITEW LKEKGISSEI SIVHGNEVDG IIEQAAKHET DMILLGSHGH KALYQLLIGS VCEGVLRKAA IPVVIVPKGN TKKNVAPPAQ D
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