Gene Paes_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2083 
Symbol 
ID6460594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2266677 
End bp2268320 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content57% 
IMG OID642726067 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_002016740 
Protein GI194334880 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG0069] Glutamate synthase domain 2
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAACA ATTTAAAGAC AAAAAAAGTT AAAGTTGCAA CATGGAGCAT GCTGGAAGAA 
AAAAAACCGG AATATGCGCT GGTTGCAGGC GTTGATCTTG TCGTCATCCG TTCTAAAGAC
CAGGTTTCAG TCCTCTACGG CCGGTGCCAT CACCGCGGCG GCCTCATGGC CGATGGCCAT
GTTGAGGGCA ACAACCTGCT CTGCCCCCTG CACGGCTGGG ACTACCGCTT TGACAGCGGT
GTAAGCGAGT ACAACAATGA AGAAGCGCTG CAGCAGTTCA CGGCATGGAT TGACACCGAT
GCCGACGCGG TACTTGTCGA TGAAAAAGAG ATCACGCTCT GGGCAGCAGA GCACCCGCAG
CCTTGGAGCA GGGAGTCCTA CCAGGGGCTC TACGCCGATA TGAAAGGAAC TCCCGAAGAA
CCATTCAACA GCGCCATACA CCAACTCGCA TCAACCCCTC ACGAAGCCTT TCACGCCCAT
GGCAGCATAT CGGCAATGGG CGTCCCGCTC ACCGACCTTC CGCGCTGGGA AGACATCCAG
ATACTCACGG CGCAGCTTGC CCGACCGCCA CTGCAGGATG ACACTCCGGT CGATACAACC
CTTATCATAG GCCCCAACGC CAGGCGTCCG CTGCAACTCT CGATGCCTCT GTTTGTCAGC
GACATGAGCT TCGGAGCGCT CGGAAGAGAG ATCAAGATAG CCCTCTCCAG AGGCGCCGAA
ACTGCCGGTA CAGGCATCGC CTCGGGAGAA GGCGGCATGC TTGAAGATGA ACAGCGTGAA
AACTCGCACT ATTTCTATGA ACTTGCGCCG GCAAGGTTCG GCTGGGATAT TGAAAAGGTA
GCCCGCTGCC AGGCGTTTCA CTTCAAGGCG GGACAAGCTG CAAAAACCGG AGTCGGCGGA
CTGCTTCCCG CAGCAAAAGT CAGCGAAGAG ATTGCCAGGG TCAGAGGCGT TGCATTGCAC
CACGATGCCG TCTCCCCTGC CGGATTTGCC GACCTGAAAA CACCCCGGGA CTTCAGACGG
GTCGCCGACG AGGTTCGCCG GGCAACCGGC GGCATTCCCG TAGGCTTCAA GATGTCGGCA
CAGCATATCG AGAAGGATAT CGATTTTGCT CTGGAAGCGG GGACGGACTA TATCATTCTC
GACGGCAGAG GCGGAGGAAC GGGGGCTGCT CCCGATCTGC TGAAAAACAA TATCGGAGTA
CCGACCATCG CGGCGCTCAG CCGGGCCCGT GCTCATCTCG ACAAGCGGCA GGCCGACGGC
GTCACCCTGA TCATAACAGG AGGTCTTCGC ACCGAATCGC ATTTCATCAA AGCCCTTGCC
ATGGGCGCGG ACGGCATCGC GATAGCCAAT GCGGCAATTC AGGCAGCCGG ATGTCTGTCA
ATGCGAGCAT GCAATAATAA CAACTGTCCT GTCGGCATCG CAACACAAGA TCCGCGTCTG
CGGGAACGCA TTGTCATCGA ACGCGCTGCC GCGCGTCTCA CAAACTTCCT CCTCAATACC
ATGGAGATGA TGAAAGTAAT GGGAAGGGCT TGCGGCTACA GTCGCCTGGC GGATTTCAAT
CAGGACGATC TCAGCACCTG GAAGCAGGAA ATGGCCTCAC TTGCCGGCAT TGCATATGCA
GGCGATACCG GCAGACAGAG GTAA
 
Protein sequence
MYNNLKTKKV KVATWSMLEE KKPEYALVAG VDLVVIRSKD QVSVLYGRCH HRGGLMADGH 
VEGNNLLCPL HGWDYRFDSG VSEYNNEEAL QQFTAWIDTD ADAVLVDEKE ITLWAAEHPQ
PWSRESYQGL YADMKGTPEE PFNSAIHQLA STPHEAFHAH GSISAMGVPL TDLPRWEDIQ
ILTAQLARPP LQDDTPVDTT LIIGPNARRP LQLSMPLFVS DMSFGALGRE IKIALSRGAE
TAGTGIASGE GGMLEDEQRE NSHYFYELAP ARFGWDIEKV ARCQAFHFKA GQAAKTGVGG
LLPAAKVSEE IARVRGVALH HDAVSPAGFA DLKTPRDFRR VADEVRRATG GIPVGFKMSA
QHIEKDIDFA LEAGTDYIIL DGRGGGTGAA PDLLKNNIGV PTIAALSRAR AHLDKRQADG
VTLIITGGLR TESHFIKALA MGADGIAIAN AAIQAAGCLS MRACNNNNCP VGIATQDPRL
RERIVIERAA ARLTNFLLNT MEMMKVMGRA CGYSRLADFN QDDLSTWKQE MASLAGIAYA
GDTGRQR