Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2080 |
Symbol | gatB |
ID | 6460664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2263123 |
End bp | 2264568 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642726064 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_002016737 |
Protein GI | 194334877 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATG AATTAGTTGT GGGCCTTGAA GTCCACTGTC AGTTAAATAC GAACAGCAAA GCGTTCTGCG GCTGTTCGAC CGAGTTCGGC AAACCGGCAA ACACCAATGT TTGTCCGGTT TGTCTGGCTT TACCGGGGGC CCTGCCGGTC CTGAACCAGA GAGTTGTCGA CGATGCCATC AAGCTTGGGA TGTCAACAGG TTGTTCCATC GCGCCTCATT CTGTTCTTGC CAGGAAAAAC TATTTTTATC CCGATCTGCC GAAAGGATAT CAGATTTCAC AGTTTGAAGA ACCTATCTGT CTTGAGGGTT GTCTATCGAT CGATGCGGGT GAGGGGCAGA GGGATATACG TCTGATTCGA ATACACATCG AAGAGGATGC CGGTAAATCT ATTCACGATA TCGGTGACGA TACCTTTATC GATGCCAACC GGAGTGGCGT TCCTCTTCTT GAAATAGTCA GTTACCCCGA TATCCGTTCT TCGAAAGAGG CTTCGGCATA TCTGCAGAAG CTGCGTCAGA TTGTCAAATA TCTCGGTATT TCCGATGGGA ATATGGAGGA GGGCAGTCTT CGTTGTGATG CCAACGTGTC GATGCGCCCG AGAGGCGAGA GCGAATACGG CACGAGAACC GAGATCAAGA ATATGAACTC GTTCAAGAGC GTTGAAAAGG CGATCGAGTA TGAAGCGCAG CGTCATATTG ACGTGCTTGA AGCCGGAGGA ACCATTGTTC AGGAAACCCG TCTCTGGGAT GCCGACAAGC TTGAAACCCG TTCCATGCGC GGCAAGGAGT TCTCTCATGA CTACCGGTAT TTTCCGGACC CTGATCTGGT TCCGATCGCT GTTGACGATG CAATGCTTGA TCGTCTCCGA AAAGAACTTC CCGAGTTTCC CGAGGCCCGT GCTGCCCGTT TTGTCGAGGA GTACGATATT CCGCCATATG ATGCAGGCGT CTTGACTGCG GAACGTGAAA TCGCCGATTA CTTCGAGGAG ACGGTGAGGG TTTCCGGTGA TGGAAAAGCT GCTTCAAACT GGGTCATGGG CGAGGTGCTC CGGACCCTTA AAGAGAAGTA TATTCCGATT GCCTCCTTTA CTATTTCGCC TGAGCGGCTC GGTGAACTGA TAGGCCTCAT CGCGAAGGGA ACGATCAGTA ACACCATCGC CAAGCAGGTT TTCGAGAAAA TGCAGGAGCT TGACGAGGGG CCGCAGGAAA TTGTCAGGAA AGAAGGCCTT GCTCAGGTTT CAGATACCGG TGCGATCGAG GGTGTCGTTC AGGAGATTAT TGATGCTAAC CCGGCACAGG TTGAACAGTA CAGGAGCGGT AAAACCAGGA TTTTCGGCTT TTTTGTCGGA CAGTGTATGA AAGAGATGAA AGGCAAGGCC AATCCTGCGG TGGTCAATGA TATTCTGAAA CAGAAACTTG ATGAGGGTAT GACGGGCGAT GCCTAA
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Protein sequence | MSYELVVGLE VHCQLNTNSK AFCGCSTEFG KPANTNVCPV CLALPGALPV LNQRVVDDAI KLGMSTGCSI APHSVLARKN YFYPDLPKGY QISQFEEPIC LEGCLSIDAG EGQRDIRLIR IHIEEDAGKS IHDIGDDTFI DANRSGVPLL EIVSYPDIRS SKEASAYLQK LRQIVKYLGI SDGNMEEGSL RCDANVSMRP RGESEYGTRT EIKNMNSFKS VEKAIEYEAQ RHIDVLEAGG TIVQETRLWD ADKLETRSMR GKEFSHDYRY FPDPDLVPIA VDDAMLDRLR KELPEFPEAR AARFVEEYDI PPYDAGVLTA EREIADYFEE TVRVSGDGKA ASNWVMGEVL RTLKEKYIPI ASFTISPERL GELIGLIAKG TISNTIAKQV FEKMQELDEG PQEIVRKEGL AQVSDTGAIE GVVQEIIDAN PAQVEQYRSG KTRIFGFFVG QCMKEMKGKA NPAVVNDILK QKLDEGMTGD A
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