Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2035 |
Symbol | gidB |
ID | 6459492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 2232738 |
End bp | 2233403 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642726018 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_002016692 |
Protein GI | 194334832 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00382628 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.306355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA ATCCCGAACG TGAAAGAAAT CAGATTATGC AAGCCTGCAC AGAACACGGG CTTGCTCTCG ATACACGACA AATTGAACAA CTGGAGGAGT ATGCCAGGCT GCTTGAATCG ATAAACCGCT CAATCAATCT TGTAAGCAGA AAGGAAGAAT CCTCGTTATT GATACGACAC GTCTTTCACT CTCTGCTTGT GGGTTTTCAC TATCCCTTTC AACAGGGAGA AAAAGTGCTT GATCTCGGCA CAGGAGGTGG GCTTCCGGGT ATTCCCCTTG CTATAGCGTA CCCCGAAACA GATTTTCTGC TCATAGACGC TACGGGCAAA AAGATCGATG CCTGCCGGGA AATGATCACG ACGCTCGGTC TGAAAAATGT TCATGCAAAA AAAATACGTG CCGAAGAGCT GACAGGACTG ATGTTCGATG TTGTCCTGAG TCGTCAGGTG GCGCCGTTGC GCAAACTTTG CCGATACGCC GAAAAAATCC TGAGACCTGA AGGATTGCTG ATCTGTCTGA AGGGGGGTAA TCTTGAAAAG GAAATAGAGG ACGCACTGGA TAGCGCACAG AAAAACAACG GCTTGCCGTC GGATGTTGTT CAGCATCCGC TGGACGCGTT TGATCCCTGT TTTGAAGAAA AATATATAGT CATTGCCTAC AGGTAA
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Protein sequence | MEKNPERERN QIMQACTEHG LALDTRQIEQ LEEYARLLES INRSINLVSR KEESSLLIRH VFHSLLVGFH YPFQQGEKVL DLGTGGGLPG IPLAIAYPET DFLLIDATGK KIDACREMIT TLGLKNVHAK KIRAEELTGL MFDVVLSRQV APLRKLCRYA EKILRPEGLL ICLKGGNLEK EIEDALDSAQ KNNGLPSDVV QHPLDAFDPC FEEKYIVIAY R
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