| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1955 |
|---|
| Symbol | |
|---|
| ID | 6459968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 2137681 |
|---|
| End bp | 2138559 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642725940 |
|---|
| Product | nicotinate-nucleotide pyrophosphorylase |
|---|
| Protein accession | YP_002016614 |
|---|
| Protein GI | 194334754 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGC GCGATTTTAA CGATTTTTTC GAGATGTGCA GAGTTCGCAC CATCATGCAG
GCTCTTGAGG AGGATCGATA TGATGGGGAT GTGACGACTA TGGCGACAAT TGATCCTCAG
CAGGAAGGTA CGGCGGTCAT TCGCGCCAAG GCGCGCGGGG TTCTGGCCGG TGTCGATGTG
GCACGTCAGG TGTTTGCACT CATGGATCCG ACGATTGTCA CGACTGTGCT CAAGGAGGAC
GGCGCTCTTT CTGAAGAGGG GGAGACGGTA CTGGAAGTCA GGGGAAAGGT TGCATCGCTG
CTCGTCGCGG AGCGTACCGC GCTCAATTTT ATGCAGCGCA TGTCGGGGAT TGCAACAAGA
ACGCGAGCCT ATGTGGATCT GATTGCTCAT ACGGGAACTC AAATTCTCGA TACCCGCAAG
ACAGCTCCCG GGTTACGGTA TTTTGATAAA GAAGCGGTGA AAATCGGCAG CGGGCGGAAT
CATCGTTTCG GTTTATTCGA TCTCGTACTC ATCAAAGATA ACCATATTGA TGCGGCTGGA
GGTATTGTGG CTGCGATCGA AAGGGCTCGT GAATATCTTA CCGGGAGGGG CCTTTCGATG
AAGATCGAGG CTGAGGTCCG TTCCATGGAT GAGTTGAAGC AGGCTCTTTC AGCACGACCC
GATATTGTGC TTCTTGATAA TTTTGCACTT GAGACGACAC GCGATGCTGT AGGCTATGTG
CGTCAGCATG CGCCGCAAAC CGTTCTCGAG GCTTCGGGAA ATGTGGGATT GCACAATGTT
GTCGCTTTGG CGGAGACCGG TGTCGATTTC ATTTCTATCG GCGAACTGAC CCATACTGTG
ACGGCCCTTG ACCTGTCGAT GACGATATCA TTTGTCTGA
|
|---|
| Protein sequence | MKQRDFNDFF EMCRVRTIMQ ALEEDRYDGD VTTMATIDPQ QEGTAVIRAK ARGVLAGVDV
ARQVFALMDP TIVTTVLKED GALSEEGETV LEVRGKVASL LVAERTALNF MQRMSGIATR
TRAYVDLIAH TGTQILDTRK TAPGLRYFDK EAVKIGSGRN HRFGLFDLVL IKDNHIDAAG
GIVAAIERAR EYLTGRGLSM KIEAEVRSMD ELKQALSARP DIVLLDNFAL ETTRDAVGYV
RQHAPQTVLE ASGNVGLHNV VALAETGVDF ISIGELTHTV TALDLSMTIS FV
|
|---|
| |