Gene Paes_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1912 
Symbol 
ID6460068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2092900 
End bp2093928 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content51% 
IMG OID642725897 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_002016571 
Protein GI194334711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGA ACATGAAACT TCATCTTTCT GAAACACTTC CTGCTGATTT CCTGACAACT 
TCAGCCCGGA AACTCAACGA TATCCTGCCC GGCCCGTCGC TCTTCTTTCT GAAAGGAAAG
CGTAACCCCC CGCTCTTTAT CTCGATCCTG CTGCATGGGA ATGAAACAAC GGGACTGCTG
GCCGTGCAGC ATATGCTGAA AACAATTGAA GCAAAATTGC CCCGTAGCGT CATCCTGTTT
ATCGGTAATG TCCGGGCAGC GAAAGCAGGC GTAAGAAAAA TGGCGGACGA GCCGGACTAT
AACAGAATAT GGAGCAGCGG ATCGTCGAAG GAGGAACGGC TTGCTTCGGA AGTACTGGGC
CACATCGCCG GCCAGGCTCC CCTGGCATGC ATCGACATAC ATAACAATAC CGGTAAAAAC
CCGCACTACG CCTGCATCAA TACGCTCGAC CGGGCAACAC TGAACCTTGC CGCAAGGTTC
AGCCCCACAA TCGTTTACTT TACCGAACCG CATGAGGTCA TCTCGATCGC CTGTTCACGC
ATAGCGCCAT CCGTAACGCT TGAATGCGGT ATCGCAGGAG ATACTGAAGG AACGCTGCAC
ACTGCCGATT ATCTCATAGC ATGCCTCAGG AGCCCTGCAT CGAAACTCTT CGCCCACCCG
GAAAAATCAC ATGACGATGT GTTCCATACC GTTGCAAAAA TCTCGATTCC CGACAACGTC
CGGCCTGGAT TCGGTAACCG CTGCGATGAC GCCGATATCT GTTTCAGAAG TGATTTCGAT
CTGCTGAACT TCACACGGGT AGCTTCCGGA ACACTCCTGG GAACAGCACT GACACCCTCC
GGATTGCTCT ATGTATCAAA CAACATGAAC ATGGATGTGA CCAATGAGTA TTTTTCTGTT
CTGAACGGAG AAATCCGAAC GACAAGGCAT TTTATTCCTG CCATGTTCAC TATGGACAGA
ACAATCATTC AACAGGACTG CCTTGGCTAT ATCATGGAAC CCTATCCGCT ACAACAAGAG
AACCGTTGA
 
Protein sequence
MTTNMKLHLS ETLPADFLTT SARKLNDILP GPSLFFLKGK RNPPLFISIL LHGNETTGLL 
AVQHMLKTIE AKLPRSVILF IGNVRAAKAG VRKMADEPDY NRIWSSGSSK EERLASEVLG
HIAGQAPLAC IDIHNNTGKN PHYACINTLD RATLNLAARF SPTIVYFTEP HEVISIACSR
IAPSVTLECG IAGDTEGTLH TADYLIACLR SPASKLFAHP EKSHDDVFHT VAKISIPDNV
RPGFGNRCDD ADICFRSDFD LLNFTRVASG TLLGTALTPS GLLYVSNNMN MDVTNEYFSV
LNGEIRTTRH FIPAMFTMDR TIIQQDCLGY IMEPYPLQQE NR