Gene Paes_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1896 
Symbol 
ID6460093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2074359 
End bp2075087 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content50% 
IMG OID642725881 
Producthypothetical protein 
Protein accessionYP_002016555 
Protein GI194334695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00275112 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCA GAGTATTTGC TCTTTTTGCC TTCCTGCTGC TTTGTATGCC TTTTCAGGCC 
GATGCAACGT CTTTACGAAA GCTTCCTGTT GAGAAACATA TTGAAACCAT CTATCGTCTG
CCGGAGGTCC GCAGTAATCT TGATTACAAG ACTCTTCAGA TGGCGGTCAG CGGTTATATG
CGGCTTCGCG ACAATGGTGT CCTGGGTAAT GACGATGTGT TGACTATTAT CGATTACAAC
AAGCCGTCGG TCAGGAAACG CATGTTCGTT ATCGATGTCA ACAACAATCG GCTTCTGGCC
TCGTCGCTTG TTGCTCATGG TAAAAACAGC GGCCAGAACA TGGCTATGAG TTTTTCCAAT
ATTCCCGGTT CGTTCAAAAG CAGCCTCGGC TTTTTCGTGA CGGGCCAGAC CTATCAGGGC
AAGCATGGAT ATTCTCTTCG CCTCAAAGGT ATCGAACGAG GGATCAACAG TAATGCTGAA
ACGCGCAATA TCGTGATTCA CGGTGCCGAT TACGTCTCTG AAGCGTTTAT CAAGCGCCAC
GGCCGTCTCG GCAGGAGCCT CGGGTGTCCC GCGCTGCCTA TGGGGAGCTC CCACCGTGTT
ATCGATCTCA TCAAAGGGGG GTCCTGCCTT TTTATCTATA ACGGCGACGA CAGCTACGTC
TATGATTCCC GTCTTGTGAA GCCTGATTTT GCGATGCAGT CCGGTGGCGG AGCATCTCGT
CGTTCATAA
 
Protein sequence
MTPRVFALFA FLLLCMPFQA DATSLRKLPV EKHIETIYRL PEVRSNLDYK TLQMAVSGYM 
RLRDNGVLGN DDVLTIIDYN KPSVRKRMFV IDVNNNRLLA SSLVAHGKNS GQNMAMSFSN
IPGSFKSSLG FFVTGQTYQG KHGYSLRLKG IERGINSNAE TRNIVIHGAD YVSEAFIKRH
GRLGRSLGCP ALPMGSSHRV IDLIKGGSCL FIYNGDDSYV YDSRLVKPDF AMQSGGGASR
RS