| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1835 |
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| Symbol | |
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| ID | 6460224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2003541 |
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| End bp | 2004440 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642725819 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_002016494 |
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| Protein GI | 194334634 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.885332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAAC TAAAAATCAG TAAACAGATC ACCAATCGTG AGAGTTTATC TCTTGATCGG
TATCTGCAGG AGATCGGCAA ATACGAGCTG CTGACAGCGG AAGATGAGGT CAAACTGACC
ATGGCGATCA AGGAAGGATA TGACATGCCG GTCGATACTC CTGAGTACAA GCGAGCAAAG
AGAGCGCTCG ATAAGCTGAT CAAGGGAAAT CTTCGCTTTG TTGTATCAGT AGCCAAACAG
TATCAGAATC AGGGTTTAAC TCTTGGTGAT CTTATCAATG AGGGAAACCT CGGCCTGATC
AAGGCAGCAA AACGTTTTGA TGAGACCCGT GGCTTTAAAT TTATTTCCTA TGCTGTCTGG
TGGATCAGGC AGTCAATTCT TCAGGCTCTT GCCGAACAGT CGAGAATTGT GCGTCTTCCT
TTAAACAGGG TAGGGACGCT CAACAAGATC AGCAAGGCAT ACAGTCAGCT TGAACAGGAG
TTTGAGCGGG ATCCCAATAC CAAGGAACTT GCCACTGTGC TCGACATGGA CTCACAGGAT
GTTGCCGATA CGCTCAAGAT CGCCGGCCGT CATGTCTCTG TCGATGCCCC TTTTGCCCAG
GGAGATGATA ACCGTCTGCT CGATGTGCTT CAGCATGACG GACAGAAACC AGATCATGGA
CTGACCCGCG ATTCTCTTAC CCTTGAGGTT GAGCGTTCTC TCTCGGTCCT GGCTCCCCGT
GAAGCTGACG TTATCCGTTC CTATTTCGGG ATCGGTATGG AAAACCCGCT TACGCTGGAA
GAGATCGGTG AGAAATTCAA ACTTACCCGT GAAAGAGTCC GTCAGATCAA GGAAAAAGCC
ATCAGAAGAT TGCGCCAGTC AGCCTATAGT AAAGTTCTCA AGGAGTACAT CGGCAGTTAG
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| Protein sequence | MRQLKISKQI TNRESLSLDR YLQEIGKYEL LTAEDEVKLT MAIKEGYDMP VDTPEYKRAK
RALDKLIKGN LRFVVSVAKQ YQNQGLTLGD LINEGNLGLI KAAKRFDETR GFKFISYAVW
WIRQSILQAL AEQSRIVRLP LNRVGTLNKI SKAYSQLEQE FERDPNTKEL ATVLDMDSQD
VADTLKIAGR HVSVDAPFAQ GDDNRLLDVL QHDGQKPDHG LTRDSLTLEV ERSLSVLAPR
EADVIRSYFG IGMENPLTLE EIGEKFKLTR ERVRQIKEKA IRRLRQSAYS KVLKEYIGS
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