Gene Paes_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1834 
Symbol 
ID6460228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2001624 
End bp2003525 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content49% 
IMG OID642725818 
ProductH(+)-transporting two-sector ATPase 
Protein accessionYP_002016493 
Protein GI194334633 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAATA TTCATGTCAA GCCCGGACTG CTCAATGGCG GAGAAGATGG ACCCAGGCTG 
TTGCCGGGTA AGGATAACAA CCGTTTTCTT GCTGTTATTG ACTGGATTGT TATACTGCTT
GCTTTCCCCG CAGTTTTTTC ATTGGTTGCA GAGTATGGCT TTTATCTCAC ATCCGACCAG
ACCAGCCTGA TCCAGATCCT TGATCTTGGG ATTCTATGGA TCTTTGCCGT TTGCGGTTTT
ATACGCATTC TGCTGATTTC TGACAAGACA GGCTATCTGA AATCCCACTG GTCGGATGTC
CTGATTCTGT TTCTCATCTC CATGCTTCTG TTTTTTCCTG TCAATATCGC TGCGATCATG
CAGTCCTTCA TTCCTGGCCT GGTTCCGAAG GTGATTGCTA AAATTTCCAT CGTTCTGACC
CAGGTCCTGC TTATTCTCGC CCTTGTTCCC CCGGCGTTGC GCTATAGTCA GCGGCTCATG
TCATTCAATG TCCAGCCTGC TGCGCTCATC ATTATGAGTT TTCTGTTATT CATTTTTCTC
GGAACGTTAT TCCTGTTATT GCCCAAAGCG ACCCTCAACG GTTCAATCTC CGTGATAGAC
GCACTCTTCA TGTCAACCAG TGCGGTGTGC GTGACAGGTC TGGTTGTCGT CGATACCGCA
AAAGATCTGA CCATGTTCGG CCAGACCGTT ATCATGATTC TTATGCAGCT CGGTGGACTT
GGTATTATGA CCATGACCAC CTTTTTCGCC TATATGGTCG GCAGCGGGTC AGGCCTGAAG
GAGTATGCTA CATTGCAGAC CCTCCTCGGG GAGGAGAGCC TCGGCCGGAT ACGTTCTACT
ATTTTCCAGG TTGCTCTTTT TGCCTTCTCC TTCGAGGTGC TTGGTGCATG GATCCTCTTC
GAGCAGTTTG ATCGTTACTC GTTCGCATCC GCTCCGGATC GTCTGTTTTT TGCGATCTTT
CACTCTGTTT CCGCCTTCTG CAATGCAGGA TTCTCCCTCT GGAGTGAAAA TCTGATGGCG
CCGGGCGTTC AGAATGACAT GCTGATTCTG TCTGTCATCA TGGTGCTGAT TGTTCTCGGT
GGCCTCGGTT TTCCTGTTAT CGCCAATATC AACGCCATCG TCGCTCACCG TTTCAGAAGG
CGCTTTTTCT CAATGATCAG TGACGAACCT GTGGTTGAAA ATCTCCACAG TCCCGATGTT
GTTCAAAAGG AAAGGCTTCG GGAACGCAGG GTAAGGCTTG GACTGCACTC CAAACTTGTG
CTTATGACGA CGGGAGTACT GCTTGTTACG GGAACGCTGG GGATCTACCT TCTCGAAGTA
CATCGAACCC TTGAAGGTCT TCCGGTCACA GAGCAGGTAT TTGCATCGCT GTTTCATTCG
GTGTCGGCCA GGACTGCAGG CTTCAATACC CTTGATATCG GTCATTTTAC CATGCCGACG
CTTTTTTTTA TCATCGTCCT GATGTGGATT GGCGCTTCTC CCGGTTCAAC AGGCGGTGGA
ATCAAGACCT CGACGCTCGC CGTTGCAGTC CTTAATATTC TTGCTATCGT ATCAGGCCGG
AACCGCATTG AGATCTTCCG TAAGCAGATT GCCCAGGTGA CGGTTACCAA GGCATTCAGT
ACCGTCATTC TTTCTATTTT TTATATTTCA TGTGCACTCT TTATTCTGCT GGTGACAGAA
AACCTGCCAT TTGAGCAGCT GCTTTTCGAA GTGGTCTCCG CAGTCGGAAC TGTTGGTCTT
TCGACCGGTA TAACGCCTGC TTTGAGCATG ACCGGAAAAT GCGTCATCAT CGTTTCGATG
TTTATCGGAA GGATCGGTAT GCTTGCCGTT CTTGGCGCAG TGATTCGGCA GCGAAGCTAC
GGCCGGTATT CGTATACTGA AGAAAACGTC ATGATATCCT AA
 
Protein sequence
MGNIHVKPGL LNGGEDGPRL LPGKDNNRFL AVIDWIVILL AFPAVFSLVA EYGFYLTSDQ 
TSLIQILDLG ILWIFAVCGF IRILLISDKT GYLKSHWSDV LILFLISMLL FFPVNIAAIM
QSFIPGLVPK VIAKISIVLT QVLLILALVP PALRYSQRLM SFNVQPAALI IMSFLLFIFL
GTLFLLLPKA TLNGSISVID ALFMSTSAVC VTGLVVVDTA KDLTMFGQTV IMILMQLGGL
GIMTMTTFFA YMVGSGSGLK EYATLQTLLG EESLGRIRST IFQVALFAFS FEVLGAWILF
EQFDRYSFAS APDRLFFAIF HSVSAFCNAG FSLWSENLMA PGVQNDMLIL SVIMVLIVLG
GLGFPVIANI NAIVAHRFRR RFFSMISDEP VVENLHSPDV VQKERLRERR VRLGLHSKLV
LMTTGVLLVT GTLGIYLLEV HRTLEGLPVT EQVFASLFHS VSARTAGFNT LDIGHFTMPT
LFFIIVLMWI GASPGSTGGG IKTSTLAVAV LNILAIVSGR NRIEIFRKQI AQVTVTKAFS
TVILSIFYIS CALFILLVTE NLPFEQLLFE VVSAVGTVGL STGITPALSM TGKCVIIVSM
FIGRIGMLAV LGAVIRQRSY GRYSYTEENV MIS