| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1826 |
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| Symbol | |
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| ID | 6460244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1990210 |
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| End bp | 1992408 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642725810 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002016485 |
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| Protein GI | 194334625 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.506128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.771224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGCAC AGATCGAAAA AGATCAATAT GAAAAACTTC ACGAGGTTTT AAGGCTTGCT
CGAGCAAACC TTAAAAATTT CGATGAATCT CTCGTTCAAA GAGCGTTCTT CATGTGTTAC
CGTGCGCATG AAGGTGAAAA ACGTGCCTCG GGCGAGCCTT TTTTCTATCA TCCTGTGGAA
GTCGCCAAGA TCATGCTGAC GGAACTTCCC CTTGACGGCG TCTCAGTCGC CGCAGCGCTG
CTGCATGATG TGATCGAAGA TAGCGAATAT ACGTATGAGG ACCTGGTTGC CGAACTCGGC
TCTGAAGTTG CCGACATCGT TGAAGGATTG ACCAAGATTT CAGGGATCAT GATCAATCGT
GAGATCACCC AGGCAGAAGG GTTTCGCAAG ATGTTGCTTT CCATGGTCAA GGATATTCGG
GTGATTCTCC TCAAATTCTG CGACAGGCTA CATAACATGC GAACGCTTGG TGCGCTTCCT
GAACATCGAC GTCTCAAGAT CGCTCTTGAA ACAAGGGATA TCTATGCCCC TCTCGCACAC
CGCTTCGGTC TGGGTAAAAT GAAGGTTGAA TTGGAAAACC TTGCCTTCAA GTACATCGAT
CCTGAAATGT TCGAGATGAT CCAGCAGAAG GTCCGGCTCA GCAGGGGAGA GCGCATCGCC
TATCTCGATA AAATGATCGT ACCGATCAAG GATGATCTCC AGAAACAGGG CTTCAATCTT
GAAGTTCAAG GGCGCGCCAA GCATCTTTTT TCTATCTACA ACAAGATGCG TTTGAAAAAC
AAGCGCTTTG AGGATATCCA TGATCTTTAC GGTATACGCA TCGTTATCGA TACAGAGCGT
ATATCTGACT GTTTTGCAGC CTACGGGTTT ATTACTCAGA AATATCCTCC TCTGCCTCAG
CATTTCAAGG ATTATATCTC CATTCCCAAG CACAATGGTT ACCAGTCACT CCATTCGGCT
ATTCTCGGGC CCAGAGGGCA CGTTGTCGAA GTGCAGATCC GCACGCGCAG AATGCATGAA
TTTGCCGAGT TTGGTGTCGC TGCGCACTGG CGATACAAGG AGAAGGTTTC CAGAGATGAT
GCATCGGTCA ATACCTTCCT CCGCTGGGCC CGGGAGTTGA TCAACGATGC CGATTCAGCA
GCATCCTTTA TGGAGGGATT CAAGCTCAAT CTGTACCATG ACGAGATCTA TCTCTTTACT
CCGAAGGGGG ATATGAAAAC CCTTCCTGCA GGTGCCACCC CGATCGATTT CGCCTATTCC
ATCCATACAG AGATCGGTAA CGGCTGTATA GGAGCAAAGG TTAACGGCAA GATTGTCCGG
CTCAATTCAG AACTTCGTTC AGGAGACCGG GTTGAAGTCA TTACCTCGAG AAACCAGAAA
CCCAAAGCCG ACTGGCTCAA ATTCGTGGTG ACCCATCGAG CCAAGCTCAA AATCCGTTCG
GCAATCAACG AAGAACGGCG TCTTCAGATT GAAAAAGGGC GCGGCATGTG GGAGAAAATG
CTCTCAGGAA CCCGTAAGCT GCTCAACGAT AACGACATTA TCCGACAGGT CCGCAAGTAC
GGCATCAAAA CCCCGGCTGA CTTTTTCAGC GCTCTGGCCA ACCACCAGAT CGATCCGGAG
AAGGTCATCA AGAGCTTTGC CGAAGAACAC CGCCGTGCCG CTCTCGATGA AGGAGCTGAT
GCTGGAAGCC AATTCGATAC CTTTGCCGAG CAGGCACGCA AAGTTCCTGA AGATGAGCCC
GCCGGCAAGG GGCGTGACGA GGTTACTATA GAGGGGCTTC CCAATATCGC GTATTCCTAC
GCTAAATGCT GCAAGCCGGT GCCTGGAGAC GATATTATCG GGTTTGTCAC CAAAGAGGGG
GTTGTCAAGA TCCATCGCAA GAATTGCGTC AATGTCAGTA ACGAGAGCCT TCTCAAAAGC
GAGCGGGTTG TCAGTGTTTC ATGGAACCGT AAAGTTGAAA CCGAATTTCT GGCAGGGATC
AAGGTGATCG GCGAGGACCG CATAGGCATA ACCAATCAGA TTACCGCGGT CATATCCAAA
TCTGATACCA ATATCCGAAG CATTTCCCTC CACGCGCGCG ACGGTATGTT TATCGGTACC
GTTATGGTCT ACGTGCGCAA CATATCCCGC CTGACAGCCC TTATGGATAA AATCCGCAAG
ATCACCGGCG TTTTTTCCGT AGAACGACTC AGTAATTGA
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| Protein sequence | MLAQIEKDQY EKLHEVLRLA RANLKNFDES LVQRAFFMCY RAHEGEKRAS GEPFFYHPVE
VAKIMLTELP LDGVSVAAAL LHDVIEDSEY TYEDLVAELG SEVADIVEGL TKISGIMINR
EITQAEGFRK MLLSMVKDIR VILLKFCDRL HNMRTLGALP EHRRLKIALE TRDIYAPLAH
RFGLGKMKVE LENLAFKYID PEMFEMIQQK VRLSRGERIA YLDKMIVPIK DDLQKQGFNL
EVQGRAKHLF SIYNKMRLKN KRFEDIHDLY GIRIVIDTER ISDCFAAYGF ITQKYPPLPQ
HFKDYISIPK HNGYQSLHSA ILGPRGHVVE VQIRTRRMHE FAEFGVAAHW RYKEKVSRDD
ASVNTFLRWA RELINDADSA ASFMEGFKLN LYHDEIYLFT PKGDMKTLPA GATPIDFAYS
IHTEIGNGCI GAKVNGKIVR LNSELRSGDR VEVITSRNQK PKADWLKFVV THRAKLKIRS
AINEERRLQI EKGRGMWEKM LSGTRKLLND NDIIRQVRKY GIKTPADFFS ALANHQIDPE
KVIKSFAEEH RRAALDEGAD AGSQFDTFAE QARKVPEDEP AGKGRDEVTI EGLPNIAYSY
AKCCKPVPGD DIIGFVTKEG VVKIHRKNCV NVSNESLLKS ERVVSVSWNR KVETEFLAGI
KVIGEDRIGI TNQITAVISK SDTNIRSISL HARDGMFIGT VMVYVRNISR LTALMDKIRK
ITGVFSVERL SN
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