| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1812 |
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| Symbol | rplM |
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| ID | 6460277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1977402 |
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| End bp | 1977851 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642725796 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_002016471 |
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| Protein GI | 194334611 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.181539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAACA CGCTAAGTTT CAAAACATAT TCAGCCAAGC CGGGTGAAGT TGTGCGCAAA
TGGTACATCG TGGATGCTGA AGGAAAAGTT CTTGGCCGGC TGGCCAGTGA GATTGCAAAG
GTTCTGCGCG GTAAGCACAA GGCCCAGTTC ACTCCGCACA TCGATACCGG TGATTTCGTT
ATCGTGACCA ATGCCGAAAA AATCGGCCTG AGCGGCAAAA AAATGGATCA GAAAACCTAC
TTCTCCCACT CGAACTACCC TGGTGGCGTG AGAATTGACA ATGTCAAGGA CGTGCTGCAG
AAAAAACCGG AGCAGGTTAT TGAAAAAGCG GTCTGGGGTA TGCTTCCGCA TAACAACCTC
GGAAGACAGC TGTTCAAAAA GCTGAAAGTC TACAAAGGTA CCGAGCATCC TCATGCTGCC
CAGTGCCCGG TTGAAATGAA CGTTAACTAA
|
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| Protein sequence | MSNTLSFKTY SAKPGEVVRK WYIVDAEGKV LGRLASEIAK VLRGKHKAQF TPHIDTGDFV
IVTNAEKIGL SGKKMDQKTY FSHSNYPGGV RIDNVKDVLQ KKPEQVIEKA VWGMLPHNNL
GRQLFKKLKV YKGTEHPHAA QCPVEMNVN
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