Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1796 |
Symbol | |
ID | 6458806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1961777 |
End bp | 1962868 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642725780 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_002016455 |
Protein GI | 194334595 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0100064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0470054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTAC GCTGCGGTAT CGTCGGATTG CCGAATGTCG GAAAATCAAC TCTGTTCAAC GCTATCACCG CAAAACAGGC TGAGGCGGCT AACTATCCTT TCTGCACCAT CGAACCCAAT ATCGGAACCG TTCTCGTGCC TGATGAACGG ATGCAGGAAC TGGCGTCGAT CGTCAAGACG CCGACCATCA TTCCCGCCAC CCTTGAAATC GTCGATATCG CAGGCCTGGT CCGCGGCGCA AGCAAGGGCG AAGGGCTTGG CAACCAGTTC CTCTCGCACA TCAGAGAGGT CGACGCCATT GTTCATGTTG TCCGCTGCTT TGACGATGGT GACGTCATCC ACGTGCATGG CAAGGTTGAC CCTGCTGACG ATATCAGCAC CATTGAAACC GAACTGATGC TTGCCGATCT GGAAAGCATG GAAAAACGGA TGGACAAACT CAGAAAAAAT GCCAGGAAAG AGAAGGAACT GCTTCCTCTC GTTGAACTGG CAGAAAAAGT GATCAAAGGC CTCAGCGACG GCATACCGGC ACGAGCGCTG ATGGAAACAG ACGAGGAAAA GGCTCTTGGC AGTCAGTTCT TCCTGCTGTC GGCCAAACCG ATACTCTACG CTGCAAACGT CAGTGAGAAC GATCTTCCTG ATGGCAATGC CTACACTGCA GAAGTGCAGC GGATCGCCGA GGAGGCCGGT TCGAAAATGC TCATCATCAG TGCACAAACA GAAGCCGAAA TCGCTGAACT GCCTGAAGAA GAACGCCCTG AATTTCTCGA AAGCCTCGGC CTGCCCATGT CAGGTCTGGA CCGCATTATC CAGTCAGCCT ACGATCTGCT CGGTCTGCAT ACCTATTTTA CCGCTGGCGT CAAAGAGGTT CGTGCGTGGA CCATTCGCAA AGGCGCCGCA GCGCCGGAAG CTGCAGCGGC GATCCATACC GATTTTGAAA AAGGCTTCAT CCGCGCCGAA GTCATAGCAT ACAACGATAT GATCACCTAT GGCTCTGAAC AGAAGGCAAA AGAGGCGGGC AAAATGCGCT CGGAGGGTAA GGAGTATATT GTCAAAGACG GTGACGTGAT CGTCTTCAGG TTTAATGTGT AA
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Protein sequence | MSLRCGIVGL PNVGKSTLFN AITAKQAEAA NYPFCTIEPN IGTVLVPDER MQELASIVKT PTIIPATLEI VDIAGLVRGA SKGEGLGNQF LSHIREVDAI VHVVRCFDDG DVIHVHGKVD PADDISTIET ELMLADLESM EKRMDKLRKN ARKEKELLPL VELAEKVIKG LSDGIPARAL METDEEKALG SQFFLLSAKP ILYAANVSEN DLPDGNAYTA EVQRIAEEAG SKMLIISAQT EAEIAELPEE ERPEFLESLG LPMSGLDRII QSAYDLLGLH TYFTAGVKEV RAWTIRKGAA APEAAAAIHT DFEKGFIRAE VIAYNDMITY GSEQKAKEAG KMRSEGKEYI VKDGDVIVFR FNV
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