Gene Paes_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1709 
SymbolileS 
ID6459342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1865777 
End bp1869019 
Gene Length3243 bp 
Protein Length1080 aa 
Translation table11 
GC content49% 
IMG OID642725698 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002016374 
Protein GI194334514 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000389774 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATA AATTTTCCGA GTACCCTGCA GGTGTGCCTT ACCGCGATGT TGAAGCTGAT 
GTTTTAGCGT TTTGGAAGGA GCATGATATT TTCCATAAGA GCCTTGAAAA ACCTGATGAC
AGCATTTTTT CTTTTTATGA AGGTCCTCCG ACTGTCAATG GTAAACCGGG GGTGCATCAT
GTCTTCAGTC GTACGATCAA GGATGTGGTT TGCCGTTTTA AATCCATGCA GGGCTATAAA
GTGCCTCGTA AGGCGGGATG GGATACTCAT GGTTTGCCGG TCGAAATTGC TGTTGAGAAG
AAGCTTGGCC TGAAAAATAA AGCTCAGGTT GAGGAGTATG GTGCAGGGGA GTTCAATGCT
GAAGCCAAGG CTCTGGTTTA TCATCATATT GATGATAACC GTGAGGGGTG GGGCAAGCTG
ACCGAGGAGA TGGGGTATTG GGTTGATATG GATGATCCTT ATATCACCTG TACCAATAAT
TATATAGAAT CGGTCTGGTG GGCGTTGAAG ACGATTTTTG ATAAGGGGCT GATTTATAAG
GATTACAAGA TTGTTCCTCA GGACCCGAAA TCTGAGACGG TACTGAGTTC TCATGAGCTT
GCGCTGGGCT ATAAAGAGGT GAAGGACCCG AGCGTTTATG TGAAGTTCCG GGTTAAGGGT
GCTGATGAGT TTCTGCTTGT CTGGACGACG ACTCCGTGGA CACTTGTTTC AAATGTGGCA
CTCTGTGTCG GTTCTGATAT CGAGTATGTG AAGGTTCGCA ACCGTGATGG TGATGTCTAT
ATTCTTGCCA AGTCACGCCT GCAGGTGCTG GAGCAGAAGA AAGATGATGA GGGATCTGTT
GAGATCCTCA AGGAGTTCAA GGGAAGTGCT CTTGCCGGTA TGCGCTATGA GCCTCTGTTC
AACTGGTTGA AACCGGAAAA GCGGTGCTGG TATGTTACTG AGGGCGATTT TGTGTCGACT
GAGGATGGTA CGGGTATTGT TCATATCGCG CCTGCATTTG GTGCTGACGA CTATGAGATT
GCCAAAGCGT ATGATCTTCC GATGCTGCAG CCGGTTGCGC GAAATGGCTG TTTTACGGAT
GAAGTGCCTG AGCTGGAAGG GGTGTTTTTC AAGGATGCTG ATCCGTTGCT GATCCGTCGT
CTGAAAGATG AGGGAAAGCT GCTTCGTAAG GAGACGATCA CCCATACGTA TCCTTTTTCG
TGGCGTTACG ATGTGCCGGT TATTTACTAT GCGCGTGAGT CGTGGTATAT CAGGACGACA
AGTATTGCTG ACCGGATGGT TGAATTAAAC CGCCAGATCA ACTGGTGCCC TCCGGAAATC
GGTTCGGGTC GGTTTGGTAA CTGGCTTGAA GATAACAAGG ATTGGGCGTT GTCGCGCGAG
CGTTTCTGGG GGACTCCGCT GCCGATCTGG GTGACAGAGG ATTTTGCTAT CGGTGACGGG
GGTGATTCCG GAAACGTCTT TGCTGTTGGA TCGATCGAGG AGCTCAGGGA TGGTTTGATC
AAGATCGATG GCAGAGAGTA TCGCCTGGGC GATGCGATCG ATCAGAACCT GATTGAGCTT
GATCTGCACA AACCGTTTGT CGACAGGATA TATTTTGTCA GAGACGGTAA ACGCTACAAT
CGTACTCCTG AACTGATCGA TGTGTGGTTT GACAGCGGTT CAATGCCGTT TGCGCAGCTG
CATTATCCGT TTGAGAACAA GGAGCTTTTT GACAAGACGT TTCCTGCTGA TTTTATTGCC
GAAGGGGTTG ACCAGACGCG AGGATGGTTC TATACCCTGC ATGCTATCGC GACCTTGATT
TTTGATAAAC CGGCTTATCG GAATCTTGTG GTTAATGGCC ATATCCTTGA TAAGGAAGGT
CTCAAGATGT CGAAATCGAA GGGCAATGTT GTCGATCCAT TTGAAACGAT TAACCGTTAC
GGTGCTGATG CTCTGCGTTG GTATCTGATT GTCACAAGTC CGCCGTGGCG TCCGAAATCG
TTTAACGTTG AGGAGATTGA AGAGGAGCAG CGCCGCTTCT TCCGTGCCTA TGTCAACAGC
TACAACTTTT TTGTCATGTA TGCCAACGTT GACGGTTTTT GTTTTGATGG AGATGTTGTT
CCTGTCAGGC AACGCTCGGA ACTTGATCAG TGGATCATGT CGAGCCTGAA CTCGCTGGTT
AGCGGTGTCG AGATGCGTAT GCAACAGTAC GATATGACGG GAGCATTGAG GCTTATTAAC
GATTTTACCG TCGATAATCT TTCGAACTGG TATATCCGCC GTTCGAGAAA GCGGTTCTGG
AAAGGCGATA TGGGTCCTGA TAAGGTTGCC GCTTATCAGT CTTTGTACCA GTGTCTTGAA
ACGCTTTCGA TGCTGCTTGC TCCGTTTACT CCGTTTATTG CAGATTGGAT GTACCGGAGT
CTGAACAGTG TTTCCGGGCG TGAGCCCTGG GAATCGGTTC ATCTCTGTTC TTTTCCTGAG
CCTGAAACAA CGGCAATCAA TATGCCGCTT GAGAAGCGTA TGGAGCGTGC CCAGATTGTG
ACGTCGCTTG TCCGTACGAT GCGCGAGCGT GCTTCGATCA AGGTTCGCCA GCCGCTGAAG
CGCATTATGC TTGCTGTCGA TGATGCATCT GACCGGCAGG AGTACGAGCT GGTCAAGGAT
ATCATCATCG ACGAGGTCAA TGTTCAGCGG GTCGAATATA TTGAAGATGA GGGATCGGTT
GTGAGCAAGA AAGCCAGGCC GAATTTCAAG TCGATCGGCC CTCGTTACGG GAAGGATGCA
AAGGTGCTTG GTAATGAGAT CAGGTCATTG ACTCATCGTC AGATTTCCGC TCTTGAGTCG
GACGGGCTGC TTCAGCTTGA GGTGGATGGC CGGATCTTTA CGATCCAGCG AGATGATGTC
GATGTCCTTC GCGAGGATAT CGAAGGATGG CTGGTTGCAT CGGATGAACC GCATCGTGTT
ATGGTTGCGC TCGATACAGA GATGACTCCG GAGCTGGAAA TGCTTGGTCT TGCAAGGGAG
CTGGTGAGCC GGATTCAGAG CCTGAGAAAA GAGAGTGGTC TGGAGATTAC CGACAGGATC
GAGCTTCGAG TTGGCGGAGG GGAGCGAATC ATCAGGACTG TTGAGGAAAA TAATGCCTAT
ATCATGGCGG AAACCCTTGC AGTCAGCCTC GATTCTGTTC GGCTTGAGGA CCTTCCTGAA
GATCGTGAAG AAACCATCAA TGGGGAATTG TGCCGGTTTG CTCTTGAAAA ATCCAAACGG
TAG
 
Protein sequence
MPDKFSEYPA GVPYRDVEAD VLAFWKEHDI FHKSLEKPDD SIFSFYEGPP TVNGKPGVHH 
VFSRTIKDVV CRFKSMQGYK VPRKAGWDTH GLPVEIAVEK KLGLKNKAQV EEYGAGEFNA
EAKALVYHHI DDNREGWGKL TEEMGYWVDM DDPYITCTNN YIESVWWALK TIFDKGLIYK
DYKIVPQDPK SETVLSSHEL ALGYKEVKDP SVYVKFRVKG ADEFLLVWTT TPWTLVSNVA
LCVGSDIEYV KVRNRDGDVY ILAKSRLQVL EQKKDDEGSV EILKEFKGSA LAGMRYEPLF
NWLKPEKRCW YVTEGDFVST EDGTGIVHIA PAFGADDYEI AKAYDLPMLQ PVARNGCFTD
EVPELEGVFF KDADPLLIRR LKDEGKLLRK ETITHTYPFS WRYDVPVIYY ARESWYIRTT
SIADRMVELN RQINWCPPEI GSGRFGNWLE DNKDWALSRE RFWGTPLPIW VTEDFAIGDG
GDSGNVFAVG SIEELRDGLI KIDGREYRLG DAIDQNLIEL DLHKPFVDRI YFVRDGKRYN
RTPELIDVWF DSGSMPFAQL HYPFENKELF DKTFPADFIA EGVDQTRGWF YTLHAIATLI
FDKPAYRNLV VNGHILDKEG LKMSKSKGNV VDPFETINRY GADALRWYLI VTSPPWRPKS
FNVEEIEEEQ RRFFRAYVNS YNFFVMYANV DGFCFDGDVV PVRQRSELDQ WIMSSLNSLV
SGVEMRMQQY DMTGALRLIN DFTVDNLSNW YIRRSRKRFW KGDMGPDKVA AYQSLYQCLE
TLSMLLAPFT PFIADWMYRS LNSVSGREPW ESVHLCSFPE PETTAINMPL EKRMERAQIV
TSLVRTMRER ASIKVRQPLK RIMLAVDDAS DRQEYELVKD IIIDEVNVQR VEYIEDEGSV
VSKKARPNFK SIGPRYGKDA KVLGNEIRSL THRQISALES DGLLQLEVDG RIFTIQRDDV
DVLREDIEGW LVASDEPHRV MVALDTEMTP ELEMLGLARE LVSRIQSLRK ESGLEITDRI
ELRVGGGERI IRTVEENNAY IMAETLAVSL DSVRLEDLPE DREETINGEL CRFALEKSKR