| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1686 |
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| Symbol | |
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| ID | 6459451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1838878 |
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| End bp | 1840857 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642725674 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_002016351 |
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| Protein GI | 194334491 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAC TACCCTGTTT TCATGAAACC GATGCGTATC GGTCTTTGAA TACCATTAAT
TCACCGGAAG ATCTCAAGCG CTTCAAGCCG TCCGAGCTGC AGCAGATCGC CGATGAATGT
CGATCGTACC TCATTGACGT CATTGCAGAA AACGGAGGTC ATTTCGCATC CAGCCTGGGA
GTAGTCGAAT TGACGGTAGC GATGCACTAT GTGTTCGACT CGCCGAAAGA CAAGTTCATC
TGGGACGTCG GCCACCAGGC CTACATTCAT AAAATTCTGA CCGGACGGCG CGACCTTATG
CACACCAACC GACGCTTCAA CGGTCTTGCG GGATTCCCCA AAATCCATGA AAGCCGCCAC
GACGCCTTCG GAACAGGTCA TGCATCCACA TCCATATCGG CAGCCGCAGG TATGGCTGCA
GCAAGAGATC TTGAAGGTGG CAATGAAAAA ATCATTGCCG TTATAGGAGA CGGCAGTATG
ACAGGAGGAA TGGCTTTCGA AGCGATGAAC CATCTGGGTG ATCTGAAATC CGATGTCCTT
GTCATTCTCA ACGACAACCA GATGGCCATT TCACCGAGCA CAGGAGGGCT CAGAGACTAT
CTCATCAACA TCAGTCTCAA CAAAACCTAC AACAAACTCA GACAGTTTGT CTGGAACTCC
CTCTCGCTGA TCAACAATGA TGTCGGTGAC GCAGCCAAAA CAGCCATTCA TAAAATTGAA
GACGGCATCA AGGCATCGCT CACCCCCGGA GCATTTTTCG AAGCACTTGG CTTCAGATAT
TTCGGGCCCA TTGACGGCCA TAACATGGAC CAGCTTGTCA AAGCCATGAA AGAAATGCAG
GCACTGCCGC ATCCAAAGCT GCTCCACGTC ATCACAAAAA AAGGAAAAGG GTTCCTGCCG
GCAGAGCAGA ACCAGAGCGC CTGGCATGCC CACAGCGGAG GATTCGATAG AACAACCGGA
GAATCACTGA AGCCTTCACA AAAAAAATCC CCACCAAAAT ACCAGGAAAT TTTCGGCGAA
GCACTCACTG AAATTGCCAC CAACGACCGT AAAATTGTCG GCATAACTGC CGCCATGCCG
AGCGGAACCT CACTCGACAT CTTTCAGAAA GCCCATCCCA GGCGGTTTTA CGATGTCGGC
ATCGCAGAAC AGCATGCAGT TTCCTTTGCC GCAGGTCTGG CTGCACACGG TTATAAACCC
GTGTGCGCTA TCTACTCCAC ATTCCTGCAA AGAGCCTATG ACCAGCTCAT TCACGACGTC
GCGCTGCAGA ACCAGCATGT CATCTTTGCC ATAGATCGTG CCGGTCTTGT CGGAGAAGAT
GGACCGACCC ATCACGGATC GTTCGATCTC TCCTATCTCC ACCCCGTACC CAACATGGTT
ATCATGGCGC CAAAGGATGG CCAGGAGCTG CGCGATATGC TCTACACCGC TCTCGAACAT
CATCATGGCC CATCGGCCAT TCGCTACCCG AGAGGCCAGG CTGCTGCTAT GGAGCTGCGA
AAAGAGTTTA AAGCAATAGC AATCGGCAAG GGAGAAATCA TACGCGAGGG CAACGACATA
GCAATTCTGG CTATCGGCAG CATGGTAGGT CATGCATTAC AAGCCGCTGA GATACTCGAA
GCAAAAGGAA TAGACCCCCT CGTGGCCAAC ATGAGGTTCG TCAAACCGCT TGACACCCAA
CTTCTCGACA CCATTGCCTC AAGCCATGAA AAGATCGTTG TCATTGAAGA AAACAGTGTC
ATCGGCGGTC TGGGCAGCGG CATCGGAGAC GCTCTGCAGA AAAAAGGCAT GAAGAACAAG
GTATTCAAAA TCGGCCTGCC CGATCAATTC GTCACTCACG GCAGTATGAA CGAACTCTAC
AGCATGCTGG GACTTGACCG TAACGGCCTG GCAGAAACCG TGATAAAGAT CTATAACGGC
AGCTCCAACG CGGTAAACGA CAGTGCCCAG ACGATGATAC GAACAGAGAG ATTAGCATAA
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| Protein sequence | MTKLPCFHET DAYRSLNTIN SPEDLKRFKP SELQQIADEC RSYLIDVIAE NGGHFASSLG
VVELTVAMHY VFDSPKDKFI WDVGHQAYIH KILTGRRDLM HTNRRFNGLA GFPKIHESRH
DAFGTGHAST SISAAAGMAA ARDLEGGNEK IIAVIGDGSM TGGMAFEAMN HLGDLKSDVL
VILNDNQMAI SPSTGGLRDY LINISLNKTY NKLRQFVWNS LSLINNDVGD AAKTAIHKIE
DGIKASLTPG AFFEALGFRY FGPIDGHNMD QLVKAMKEMQ ALPHPKLLHV ITKKGKGFLP
AEQNQSAWHA HSGGFDRTTG ESLKPSQKKS PPKYQEIFGE ALTEIATNDR KIVGITAAMP
SGTSLDIFQK AHPRRFYDVG IAEQHAVSFA AGLAAHGYKP VCAIYSTFLQ RAYDQLIHDV
ALQNQHVIFA IDRAGLVGED GPTHHGSFDL SYLHPVPNMV IMAPKDGQEL RDMLYTALEH
HHGPSAIRYP RGQAAAMELR KEFKAIAIGK GEIIREGNDI AILAIGSMVG HALQAAEILE
AKGIDPLVAN MRFVKPLDTQ LLDTIASSHE KIVVIEENSV IGGLGSGIGD ALQKKGMKNK
VFKIGLPDQF VTHGSMNELY SMLGLDRNGL AETVIKIYNG SSNAVNDSAQ TMIRTERLA
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