Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1682 |
Symbol | |
ID | 6459432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1833561 |
End bp | 1835792 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642725670 |
Product | UvrD/REP helicase |
Protein accession | YP_002016347 |
Protein GI | 194334487 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTGATA TTCTTCAGCA GTTGAACGAT GTGCAGCGCC AGGCCGTTCA GACGACATCC GGGCCGGTTA TGGTTCTTGC CGGTGCCGGG TCCGGCAAGA CACGGGTTAT TACCTACAGG ATCGCCTATC TTATCGAGCA GGAGCGGGTT GAGCCGCACC AGATACTTGC CTTGACCTTT ACCAACAAGG CGGCAAAAGA GATGCGGCAC AGAATCGATC AACTGCTCCA TCAGGGCAGT ACCCGGGGAT TATGGATCGG GACATTTCAC TCTGTTTTTG CCCGTATTCT GCGAAACTAT ATCCATCTTA TCGGCTATAA CTCCAATTTT TCGATATACG ATTCGGATGA CAGCAAAAGC CTGGTGAAGC AGGTGATGAA AGAGTTGAAT ATCGATACTG ATTCGGTTCC GGTCAATACC ATACAGGGTA TTATCAGCCG GGCAAAGAAC AATTTTATTC TTCCTCCGCA GTTTCAGCGC GACGCTGCTG ATTACAACCA GCAGAAAGCG GCAAAGGTGT ATGAGGTGTA TACGCGAAAG CTGAAGGAAA ACAATGCTCT TGATTTCGAT GATCTTCTCA TCAAGCCGCT GGAGTTGTTT GTTGAAAGTC CTCAGCTTCT TGAGCAGCTG CAGGACTATT TCCGATATAT TCTCATAGAC GAGTACCAGG ACACCAACCG GGCGCAGTAC CTTGTTGCCA AACAGTTGGC ATCGAAACAC CGCAATATTT TTGTCGTGGG AGATGATGCC CAGTCAATTT ATTCCTGGCG TGGCGCCGAT ATCACCAACA TTCTGAACTT CCAGCAGGAT TACCCCGATT CGTCGGTGTT CAAGCTGGTC GAGAACTATC GCAGTACGCA GACGATTCTC AAGGCTGCCA ACGGCATCAT CAGAAAAAAC CGCCGACAGA TTGAAAAAGA GCTTGTCTCC CACAAAAGCA CCGGCGAGCC TCTGACCCTG ATCGAATCGT TCAACGAGAA ACGCGAGGCG GACAAGGTTG GGGAGTATAT CCGTTCCCTG AAATTGTCGA AGGACTACGA ATACAGGGAT TTTGCAGTCT TTTACCGCAC CAATGCCCAG TCGAGGGTCC TTGAGGATGT GTTGCGGCTG CATCGTCTTC CCTACAGAAT TTTCGGTAGT GTATCCTTCT ATAAGCGCAA GGAGATCAAG GACGCTATAG CGTACCTCCG CTTTATTCTC AATGACCACG ATAACGAGTC GCTGCTGCGC GTTATTAATT TCCCTCCGCG CAAGATTGGA GATGTCAGCA TCAACAAACT GCGTGATTTT GCCGAATCGA GGAACCTGTC GCTCTACGGT GCTATCCGTC ATGCTGCCGA GGGGGGCTTT CAGGCAAGGT TGCTCAACGC ACTCAATGCG TTCAGCTCGA TTATCGAGCA GCTTAAAGAG ATTTCCCGGG AAGGGTCTGT CTATGACGTG CTCAACTCTT TGTACGAGTT GACAGGGATT CCTTTACTGC TACGGGCTGA AAATACGCCC GAGGCGATGG CGCGGTATGA AAATCTTCAG GAGTTGCTGT CGATGGCCCG TGATTTTTCA GACCATCATC AGGGGGCAAA CGGCTTGAAT GACTTTATGA ACGATATTGC TCTTGCAACG GATTCCGATG AGATACAGGA ATCTGATAAC TATGTTTCAC TCATGACCGT TCACGCAGCC AAGGGGCTGG AGTTTCCCGT AGTATTTATT ACCGGTCTTG AGGAAAAGCT CTTTCCTCTC AATTACTATG AGCAGGAGGA ACTGGAGGAG GAGAGGCGCT TGTTTTATGT TGCCTTGACC CGCGCTCAGG AGAAACTGTA TTTGTCCTGG TCCAAGAGCC GTTACCATTA TGGTCAGCCG CAGGGCTGCA TTCGTTCGAT GTTTATCGAT GAGGTTGATA GCGATATTGT CGAGTCTGAA GGGGGGCGGC TTCTCTCGGA GTCCCGCATG GAGAGAGAGC GGCCGCGTCA GGGCGTTCAA CAGGCCGGGC GTTTCAATGG CCGTTCTTCC GTTCCGTCAT CATTCCATGA GCGACCTCGT GGTGAGGGGG CCGGGGTGAA AAAAACTTCG GACATGAAAG CCGGAACGAG GGTTCATCAT GCTATGTTCG GGCCTGGCGT GGTTATGGCG GTTCAGGGTA GCGGTTCTCG TCAGAAAGCA CAGATCAAGT TCAGGAATGC CGGCGAAAAA ACCCTTATGG TTCAGTACGC TAATCTTACA ATTGTTTCAT AG
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Protein sequence | MSDILQQLND VQRQAVQTTS GPVMVLAGAG SGKTRVITYR IAYLIEQERV EPHQILALTF TNKAAKEMRH RIDQLLHQGS TRGLWIGTFH SVFARILRNY IHLIGYNSNF SIYDSDDSKS LVKQVMKELN IDTDSVPVNT IQGIISRAKN NFILPPQFQR DAADYNQQKA AKVYEVYTRK LKENNALDFD DLLIKPLELF VESPQLLEQL QDYFRYILID EYQDTNRAQY LVAKQLASKH RNIFVVGDDA QSIYSWRGAD ITNILNFQQD YPDSSVFKLV ENYRSTQTIL KAANGIIRKN RRQIEKELVS HKSTGEPLTL IESFNEKREA DKVGEYIRSL KLSKDYEYRD FAVFYRTNAQ SRVLEDVLRL HRLPYRIFGS VSFYKRKEIK DAIAYLRFIL NDHDNESLLR VINFPPRKIG DVSINKLRDF AESRNLSLYG AIRHAAEGGF QARLLNALNA FSSIIEQLKE ISREGSVYDV LNSLYELTGI PLLLRAENTP EAMARYENLQ ELLSMARDFS DHHQGANGLN DFMNDIALAT DSDEIQESDN YVSLMTVHAA KGLEFPVVFI TGLEEKLFPL NYYEQEELEE ERRLFYVALT RAQEKLYLSW SKSRYHYGQP QGCIRSMFID EVDSDIVESE GGRLLSESRM ERERPRQGVQ QAGRFNGRSS VPSSFHERPR GEGAGVKKTS DMKAGTRVHH AMFGPGVVMA VQGSGSRQKA QIKFRNAGEK TLMVQYANLT IVS
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