| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1626 |
|---|
| Symbol | |
|---|
| ID | 6459872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1770089 |
|---|
| End bp | 1770493 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642725614 |
|---|
| Product | large conductance mechanosensitive channel protein |
|---|
| Protein accession | YP_002016291 |
|---|
| Protein GI | 194334431 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1970] Large-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000392194 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTTA TTCAGGAGTT TAAGGACTTC GCGATGCGGG GAAATGTTGT TGATCTGGCT
GTTGGTATCA TTATCGGCGG AGCATTCGGA AAGGTTGTGA CGGCACTTGT GGATGGCGTT
CTTATGCCTC CGATCGGTTT ATTGATAGGG GGGGTGAATT TTGATCAGCT TGCGTTCGAA
TTGAGGGCTG CCACAGCAGA GAGTGCGGCG GTGAGTCTCA ACTACGGTGC ATTTTTGCAA
ACGATCGTTG ATTTTGTCAT CATAGCCTTT TCAATATTTG TTGTTATCAA GGCGTTGAAT
TCACTGAAAC GAAAGAGTGA GGAAGCTCCC AAAGCTCCTC CGGTACCGTC GAAAGAAGAG
GTGTTGCTCG GTGAGATTCG CGATCTGTTG AAAGAGAGAG GTTAG
|
|---|
| Protein sequence | MGFIQEFKDF AMRGNVVDLA VGIIIGGAFG KVVTALVDGV LMPPIGLLIG GVNFDQLAFE
LRAATAESAA VSLNYGAFLQ TIVDFVIIAF SIFVVIKALN SLKRKSEEAP KAPPVPSKEE
VLLGEIRDLL KERG
|
|---|
| |