Gene Paes_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1619 
Symbol 
ID6460703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1760761 
End bp1761738 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content50% 
IMG OID642725607 
ProductNa+/Ca+ antiporter, CaCA family 
Protein accessionYP_002016284 
Protein GI194334424 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTAG ATAGCGTTCT TCTTGTACTC GGGCTCGGAC TTCTCCTTTC AGGCGGCAAT 
TTTCTGGTAA CCGGAGCGTC TGCTCTGGCT CGAAATCTGG GGGTGCCTCC TTTGGTGATC
GGATTGACTG TGGTGGCATT CGGTACCAGT GCTCCGGAGC TTTCCATTAA CCTGCTTGGT
GCTATTCAGG GAAACGGAGC GATTTCCTTT GGCAATATTA TCGGTTCGAA TATCGCCAAT
ATCGGCCTTA TACTCGGAGT GACAGCGCTT ATCCGGCCAT TGGTGATCGA GAGTGTGATC
ATTTCCAGAG AGATTCCCAT GTTGATCCTG GTTTCTGTCA TTGCCATGAT TGCCGGTAAT
GATCTATTCC TTCGTTCTTC GACGGGAATG TTCGATCGTT CGGACGGACT GATTTTTCTT
ATGCTGTTCG GGGTGTTCAT GTACTATACC ATCGGCGATG TTGTCAAGAA ACGCCGTGAT
ACTCTGGTTG AAGAGGCTGA GGCGTTTGCC GGGGGAAAGG GTCTGCGTGA TACCGTCATG
AACCTTGCTC TTTTCGGGGG CGGTCTGGCC GGCCTGATTC TTGGCGGAAA ACTTTCAGTT
GATGCTGCAG TTGCTATTGC TGCAGCCATG CAGGTGCCTG AGGTTATTAT CGGGTTGACT
GTCGTTGCTA TCGGTACAAG CCTTCCGGAA CTGGCAACCT CTCTTGTTGC AACCTTTCAG
GGGAAAAACG ATATTGCCGT AGGAAATGTC ATCGGGTCCA ACATTTTTAA TCTGCTGCTC
GTCAACGGAC TTTGTTCCGC CGTGCGTCCT ATTGCGGTTC CTCTGCAAGG GGGACTTGTC
GATTTGTTCA TGATGACTCT GCTGGCGTTT TTTCTTCTGC CGATGAGTAT AACGGACGGC
AGAAAGATTG TGCGATGGGA AGGAGCTGTC CTGCTTCTGA TCTATCTTGC CTACAATGTC
TGGAGAGTTC TCGGCTGA
 
Protein sequence
MLLDSVLLVL GLGLLLSGGN FLVTGASALA RNLGVPPLVI GLTVVAFGTS APELSINLLG 
AIQGNGAISF GNIIGSNIAN IGLILGVTAL IRPLVIESVI ISREIPMLIL VSVIAMIAGN
DLFLRSSTGM FDRSDGLIFL MLFGVFMYYT IGDVVKKRRD TLVEEAEAFA GGKGLRDTVM
NLALFGGGLA GLILGGKLSV DAAVAIAAAM QVPEVIIGLT VVAIGTSLPE LATSLVATFQ
GKNDIAVGNV IGSNIFNLLL VNGLCSAVRP IAVPLQGGLV DLFMMTLLAF FLLPMSITDG
RKIVRWEGAV LLLIYLAYNV WRVLG