Gene Paes_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1589 
Symbol 
ID6459174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1730952 
End bp1732256 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content53% 
IMG OID642725577 
ProductXanthine/uracil/vitamin C permease 
Protein accessionYP_002016254 
Protein GI194334394 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000320476 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TCTTTGCATT CGACCTTCAC CAGACCAGCT ACCGCCAGGA GATCCTCGCA 
GGAATAACGA CGTTTGTAAC GGTTTCCTAT ATCATCATTG TCAATCCCGC GATTCTTCAG
GCAGCCGGCA TCCCCCGGGA AGCCTCGATG ACCGCAACCA TCCTCACCGC TGTTTTCGGC
ACGCTTCTGA TGGGTCTCTA CGCAAAAAGA CCCTTTGCTA TCGCCCCCTA CATGGGGGAA
AATGCGTTTA TCGCCTATAC CGTTGTCCAG ATGCTGGGTT ACAGCTGGCA GACTGCCCTT
GCATCGATCT TTATCAGCGG CGTCCTGTTT ACACTCCTGA CCCTTGCCGG TCTGAGAAGT
TGGCTGGCAC GAGCGATCCC GCGAACGCTC AAACACAGCT TTTCCATCGG CATAGGCCTC
TTCCTGGCCT TTATCGGGCT GAACGATATG GGTATCGTCA CCCTCGGGGT TCCAGGGGCA
CCGGTCAGAA TGGCCGACAT CTCAACACTT CCGGTCCTCT TCAGCATACT CGGTCTTCTC
CTGATCTCCA TACTCCTGAT CTTCAGGGTG AGCGGCGCAA TTCTGATCGG GATCCTTGTA
ACCACGGCTG CACTGATCGC AACAGGAACA GTCGCGCTTC CGTCAGCCAT TATCAGCATG
CCGCCCTCAC TCTCTCCGAT CCTGTGGAAG ATCGATTTCA GCGGAGCCAT GACGTGGGGA
TTCATCGGAG TCATCACCAG CGTTCTGGTC ATGGACTTCG TCGATACCAT GGGAACGCTT
ATCGGGCTCT CCTCCAGAGC GAACCTGCTT GATGAAGAGG ACAATCTTCC TGAAATCGAA
AAACCGATGC TGGTCGATGC GCTCTCGACC GTTGCTGCAT CGATGTTCGG GACAACGACC
GCAGGAGTCT ACATTGAGTC AGCTGCCGGA ATAGAGCAGG GGGGAAAAAC CGGGTTTACC
GCAATTGTTG TTGCCATGCT CTTTGCCGCC TCGCTGTTTT TCTCCCCTCT CCTGACCGTC
ATCCCCTCAC AGGCCTACGG ACCGGCGCTC GTCATCGTGG GAATGTTCAT GCTGCAGTCG
GTAACAAAAT TTGATTTTGA CGATTACAGC GAACTCATAC CGGCATTTCT CACGATCGTG
CTCATGATCT TCACCTTCAA TATCGGGGTA GGCATCACTG CCGGCTTTAT CAGCTATGTT
ATCATCAAAC TTGCAACAGG CAGAGCGCGT GAGATTCACA GCGGCATGTG GGTCCTGGCA
CTGCTATCAC TGACATTTTA TCTGTTTTAT CCCTATCATT CATGA
 
Protein sequence
MKNFFAFDLH QTSYRQEILA GITTFVTVSY IIIVNPAILQ AAGIPREASM TATILTAVFG 
TLLMGLYAKR PFAIAPYMGE NAFIAYTVVQ MLGYSWQTAL ASIFISGVLF TLLTLAGLRS
WLARAIPRTL KHSFSIGIGL FLAFIGLNDM GIVTLGVPGA PVRMADISTL PVLFSILGLL
LISILLIFRV SGAILIGILV TTAALIATGT VALPSAIISM PPSLSPILWK IDFSGAMTWG
FIGVITSVLV MDFVDTMGTL IGLSSRANLL DEEDNLPEIE KPMLVDALST VAASMFGTTT
AGVYIESAAG IEQGGKTGFT AIVVAMLFAA SLFFSPLLTV IPSQAYGPAL VIVGMFMLQS
VTKFDFDDYS ELIPAFLTIV LMIFTFNIGV GITAGFISYV IIKLATGRAR EIHSGMWVLA
LLSLTFYLFY PYHS