| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1507 |
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| Symbol | |
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| ID | 6458858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1648121 |
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| End bp | 1649050 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642725497 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_002016174 |
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| Protein GI | 194334314 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.100446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACA GCTATACTGG ACAAACCATT GTACAGGGGT CTGATGGCGA ACTGACGCTT
GAAAACGCCT ACGAATACTG CCGTCAGATC GCAAAACACC ACGCAAAAAC ATTCTACCTG
GCGACGCTCT TCCTGTCTAA ACAGCAAAGG AAACCGATCT TTGCGATGTA TGCGCTTCTG
CGGACAGTTG ACGATCTGGT CGACATGGCA GAGGATAAGA TCAGGAGCGG TTCTCTCAGC
CGCTCCGAAC TCAGTGGTAT GATGGAGAAC TGGAAAACCC GGCTTCGTCA ATGTTATGAT
GGCGATCACA ACAATGATCC GATCATGATG GGGTGGCAGG ATACCCTGAA ACACTTCACC
ATTCCCATCG AGCTGCCGCT CGACCTTATG GATGGCGTCG CCATGGATAT CGATTTCAAG
CCGTTCGAGA CCTTTGACGA TCTCTATATT TACTGCTACA AGGTTGCGTC AGTCGTTGGC
CTGATGTGTT CAGAAATTTT CGGATACAGC GACAAAAAAG CTCTGGAACA CGCCATTGAA
CTTGGCATAG CCATGCAGTT GACCAACATC CTGCGCGACA TAGGAGAGGA TATCGACCGG
GGCAGAATCT ATCTGCCGCT CGAAGACCTG GACCGGTTCG GATATACAAG GCAGCAGTTC
ATGAAGAAGG AGATGAATGA TAACTTCATT GCGCTTATCC GCTTTCAGAT CGAACGGGCC
AGGAACTACT ACCGTCAGTC CGAACGAGGA ATACCGATGC TGCAGAAAAA CGCACGTTTC
GCCGTGATGG TCAGCAGCCT TAATTACAGC GCCATCCTAA AGACAATTGA AAAAAACGGG
TACGATGTCT TCTCGCAACG AGCCTACCGC TCTTTTTACC AGAAAATCAG CACCATTCCC
TACATCTGGT ACAAGACGAC CGTCTCCTGA
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| Protein sequence | MNYSYTGQTI VQGSDGELTL ENAYEYCRQI AKHHAKTFYL ATLFLSKQQR KPIFAMYALL
RTVDDLVDMA EDKIRSGSLS RSELSGMMEN WKTRLRQCYD GDHNNDPIMM GWQDTLKHFT
IPIELPLDLM DGVAMDIDFK PFETFDDLYI YCYKVASVVG LMCSEIFGYS DKKALEHAIE
LGIAMQLTNI LRDIGEDIDR GRIYLPLEDL DRFGYTRQQF MKKEMNDNFI ALIRFQIERA
RNYYRQSERG IPMLQKNARF AVMVSSLNYS AILKTIEKNG YDVFSQRAYR SFYQKISTIP
YIWYKTTVS
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