Gene Paes_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1489 
Symbol 
ID6458640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1628123 
End bp1628812 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content54% 
IMG OID642725478 
ProductOmpA/MotB domain protein 
Protein accessionYP_002016156 
Protein GI194334296 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00664745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACA TCAAACAGTT CAGCAAACCG CTTGCCGTGG TATTAATTCT CGCCATGACC 
TCCTTCACCT GGGGATGTAC GACCACCACC GGAGCAGGCA GAGGTGCAGG AATAGGTGCT
GCATCAGGGG CCATTCTCGG AGGCATTATC GGCAGCCAGA CAGGCAGCTG GGGTAAAGGG
GCTCTTCTTG GCGCAGTCAT AGGGGGTGCA GGCGGCGCAC TCATCGGAGA TTATATGGAC
GCGCAGGCGG AAGAGATCGA CAATTCGGTT GACGGGGCTA CCGTCGAACG TGTCGGCGAA
GGTATCAGGG TTGTCTTCGA CTCAGGTCTT CTTTTCAGTA CCGCTTCATC GACCCTGACC
TCTACCAGCC GATACAACAT TCAGAAACTT GCATCGATTC TGAACAAATA CGAAGACACC
AATGTCGTTA TCGAAGGTCA CACCGACTCT GTCGGGACGG AGAGCTCCAA CCAGCAGCTT
TCAGAAAACC GCGCAGAATC AGTAGCATCT CTGCTCAGAG CATACGGCGT CTACGGCAGC
CGCATCTCTA CGGTAGGCTA TGGCGAAACC CGTCCTGTTG CTTCAAACGA AACAGCTCAG
GGCAAGAAAC TTAACCGTCG GGTTGAAGTG CTGATTTACG CCAATGATGA TTTGAAACAG
CAGGCCGAGA CCGGCGAACT GAGAATGTAA
 
Protein sequence
MTHIKQFSKP LAVVLILAMT SFTWGCTTTT GAGRGAGIGA ASGAILGGII GSQTGSWGKG 
ALLGAVIGGA GGALIGDYMD AQAEEIDNSV DGATVERVGE GIRVVFDSGL LFSTASSTLT
STSRYNIQKL ASILNKYEDT NVVIEGHTDS VGTESSNQQL SENRAESVAS LLRAYGVYGS
RISTVGYGET RPVASNETAQ GKKLNRRVEV LIYANDDLKQ QAETGELRM