Gene Paes_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1470 
Symbol 
ID6458614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1608902 
End bp1610755 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content51% 
IMG OID642725459 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_002016137 
Protein GI194334277 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0928579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.923251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC AGGTTATAGC CAGAAAATAC AGACCGAGTA AATTCGCCGA TATTACCGCT 
CAGGAGCATA TCACGCACAC CATCCAGAAT GCGCTTCGTC TCGACAGGGT TGGCCATGGC
TATATTTTTT CGGGACTTCG GGGAGTCGGC AAGACAACCG CGGCGAGGGT ATTTGCCAAA
GCGGTCAACT GTCAGAAAAT GATTGATGAC CCTGTCTACC GTCAGGAGGT CACCGAACCT
TGCGGAGAAT GCGAAAGCTG CCTTGATTTC GATGCGGGAA CAAGTCTCAA TATTTCAGAG
TTTGACGCTG CCTCAAACAA TAGTGTTGAC GATATCCGCC AGTTACGCGA AAACGTACGC
TACGGGCCTC AGAAAGGTCG TTACCGTGTC TATATCATCG ATGAGGTTCA CATGCTTTCA
ACTGCGGCCT TCAACGCTTT TCTCAAGACG CTTGAGGAAC CGCCGTCCCA CGCTATTTTC
ATTTTCGCCA CGACGGAGCT GCACAAAATA CCGGCGACTA TTTCTTCTCG CTGTCAGCGT
TTTAATTTCA AACGTATTCC GATCGGAGAG ATCCAGTCGC AGTTGCAGAT GATCTGCAGG
GCCGAAACGC TTCAGATTTC AGATGATGCC CTTCTGCTTA TAGCGCGCAA GGCTCAGGGG
TCGATGCGCG ACGCGCAGAG CATTCTCGAT CAGGTGATAG CTTTTTCTGT TGGAAACGAC
GCTGAAAAAG TGATCGCATA CCAGGGGGTT GCAGAGTTGT TGAACTATAT CGATGACGAT
CAGTTTTTTG ATGTCAGCGA CGCTGTAGCG GAAAACGATC CGGTGAAGAT GCTTCAGGTT
GCCCGTTTTG TTATTGATAA CGGTTATGAC GAGCAGGATT TTCTCGAAAA ACTCATTGAG
CATTTCAGAA ACTTTCTTGT GCTCTACAAC CTGCGTTCTA CCCGTCTCAT TGAACGGACG
GAAAGTGTTA AGGAGCGCTA TCAGCAGAGT GCAGGGGGCT TGAGTGCCCC GCTTGTCATG
CAATTGATCG ATTTGTTGAT GAAGGAGTCC GGTGAACTGA AGTTTCAGTT CGAGTACCAG
TTCCGCTTTG AACTGACACT GCTGCGTCTG ATCGAACTTG TTCACAACGA TGGAGGTGTC
GCAGCCTCTG TAGCTGGAGG GCCGCCGGTA AAAAAAAAAG CCCCTGAACC GGATCTGAAA
CAGCCGGACA GGCATCCCGG ACCAGCAGGG AGGTCTGCTC CTGGGGCCCG ACCGGCAGAA
TTGCCTTCTC CTGCATCGAC GCCGGAGCAA CAGCCTCCAT CAGCCAGGTC AGCCTCATTG
CCCCCTTCCC CGCAACAGTC TGCACCACGC AATGTCGCGT CCGGGAAACC GGGGGTTGAT
TTCAGCGCAT GGCAGGGCAA GCTTATGAAT TTCACCAGAA ACGGTTCTCG CAAGCAGCCT
GTTCAGGCCT CTTCGTCCGA CGCTCGTCAG TCCGGCGTTT TTGAGGGCGT TGTCGAGGTT
GAAAAGTTCC GGATGGAGTG GAACCAGTTT CTTGAAATGC TTCTGAAGAA ACGACAGAAG
GTGCTTGTGA CTCATCTTCG TTCATGCGAA CTGACATCCT GTTCTCATGG AGTGCTCGTC
ATGACCTGCG GCAAGAAGTT TTCCTATGAA GAACTGATGC AGGATGCTGC TCTGCTCAGC
AAGGAGATCG AGTCATTTTA CGGCATTGCG GTCAAACTCC AGATCTGTTA TGATGCTGCC
AGAGATGCTC AGACGCGGGA ACAAACCATT TTTACCCTTT TCAGGGATCT TGCCGAAACC
AATGATGTGA TGAAGTATAT CATTAAGGAG TTTGGCGGCG AACTCGTGTA TTGA
 
Protein sequence
MSYQVIARKY RPSKFADITA QEHITHTIQN ALRLDRVGHG YIFSGLRGVG KTTAARVFAK 
AVNCQKMIDD PVYRQEVTEP CGECESCLDF DAGTSLNISE FDAASNNSVD DIRQLRENVR
YGPQKGRYRV YIIDEVHMLS TAAFNAFLKT LEEPPSHAIF IFATTELHKI PATISSRCQR
FNFKRIPIGE IQSQLQMICR AETLQISDDA LLLIARKAQG SMRDAQSILD QVIAFSVGND
AEKVIAYQGV AELLNYIDDD QFFDVSDAVA ENDPVKMLQV ARFVIDNGYD EQDFLEKLIE
HFRNFLVLYN LRSTRLIERT ESVKERYQQS AGGLSAPLVM QLIDLLMKES GELKFQFEYQ
FRFELTLLRL IELVHNDGGV AASVAGGPPV KKKAPEPDLK QPDRHPGPAG RSAPGARPAE
LPSPASTPEQ QPPSARSASL PPSPQQSAPR NVASGKPGVD FSAWQGKLMN FTRNGSRKQP
VQASSSDARQ SGVFEGVVEV EKFRMEWNQF LEMLLKKRQK VLVTHLRSCE LTSCSHGVLV
MTCGKKFSYE ELMQDAALLS KEIESFYGIA VKLQICYDAA RDAQTREQTI FTLFRDLAET
NDVMKYIIKE FGGELVY