Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1470 |
Symbol | |
ID | 6458614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1608902 |
End bp | 1610755 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642725459 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_002016137 |
Protein GI | 194334277 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0928579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.923251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATC AGGTTATAGC CAGAAAATAC AGACCGAGTA AATTCGCCGA TATTACCGCT CAGGAGCATA TCACGCACAC CATCCAGAAT GCGCTTCGTC TCGACAGGGT TGGCCATGGC TATATTTTTT CGGGACTTCG GGGAGTCGGC AAGACAACCG CGGCGAGGGT ATTTGCCAAA GCGGTCAACT GTCAGAAAAT GATTGATGAC CCTGTCTACC GTCAGGAGGT CACCGAACCT TGCGGAGAAT GCGAAAGCTG CCTTGATTTC GATGCGGGAA CAAGTCTCAA TATTTCAGAG TTTGACGCTG CCTCAAACAA TAGTGTTGAC GATATCCGCC AGTTACGCGA AAACGTACGC TACGGGCCTC AGAAAGGTCG TTACCGTGTC TATATCATCG ATGAGGTTCA CATGCTTTCA ACTGCGGCCT TCAACGCTTT TCTCAAGACG CTTGAGGAAC CGCCGTCCCA CGCTATTTTC ATTTTCGCCA CGACGGAGCT GCACAAAATA CCGGCGACTA TTTCTTCTCG CTGTCAGCGT TTTAATTTCA AACGTATTCC GATCGGAGAG ATCCAGTCGC AGTTGCAGAT GATCTGCAGG GCCGAAACGC TTCAGATTTC AGATGATGCC CTTCTGCTTA TAGCGCGCAA GGCTCAGGGG TCGATGCGCG ACGCGCAGAG CATTCTCGAT CAGGTGATAG CTTTTTCTGT TGGAAACGAC GCTGAAAAAG TGATCGCATA CCAGGGGGTT GCAGAGTTGT TGAACTATAT CGATGACGAT CAGTTTTTTG ATGTCAGCGA CGCTGTAGCG GAAAACGATC CGGTGAAGAT GCTTCAGGTT GCCCGTTTTG TTATTGATAA CGGTTATGAC GAGCAGGATT TTCTCGAAAA ACTCATTGAG CATTTCAGAA ACTTTCTTGT GCTCTACAAC CTGCGTTCTA CCCGTCTCAT TGAACGGACG GAAAGTGTTA AGGAGCGCTA TCAGCAGAGT GCAGGGGGCT TGAGTGCCCC GCTTGTCATG CAATTGATCG ATTTGTTGAT GAAGGAGTCC GGTGAACTGA AGTTTCAGTT CGAGTACCAG TTCCGCTTTG AACTGACACT GCTGCGTCTG ATCGAACTTG TTCACAACGA TGGAGGTGTC GCAGCCTCTG TAGCTGGAGG GCCGCCGGTA AAAAAAAAAG CCCCTGAACC GGATCTGAAA CAGCCGGACA GGCATCCCGG ACCAGCAGGG AGGTCTGCTC CTGGGGCCCG ACCGGCAGAA TTGCCTTCTC CTGCATCGAC GCCGGAGCAA CAGCCTCCAT CAGCCAGGTC AGCCTCATTG CCCCCTTCCC CGCAACAGTC TGCACCACGC AATGTCGCGT CCGGGAAACC GGGGGTTGAT TTCAGCGCAT GGCAGGGCAA GCTTATGAAT TTCACCAGAA ACGGTTCTCG CAAGCAGCCT GTTCAGGCCT CTTCGTCCGA CGCTCGTCAG TCCGGCGTTT TTGAGGGCGT TGTCGAGGTT GAAAAGTTCC GGATGGAGTG GAACCAGTTT CTTGAAATGC TTCTGAAGAA ACGACAGAAG GTGCTTGTGA CTCATCTTCG TTCATGCGAA CTGACATCCT GTTCTCATGG AGTGCTCGTC ATGACCTGCG GCAAGAAGTT TTCCTATGAA GAACTGATGC AGGATGCTGC TCTGCTCAGC AAGGAGATCG AGTCATTTTA CGGCATTGCG GTCAAACTCC AGATCTGTTA TGATGCTGCC AGAGATGCTC AGACGCGGGA ACAAACCATT TTTACCCTTT TCAGGGATCT TGCCGAAACC AATGATGTGA TGAAGTATAT CATTAAGGAG TTTGGCGGCG AACTCGTGTA TTGA
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Protein sequence | MSYQVIARKY RPSKFADITA QEHITHTIQN ALRLDRVGHG YIFSGLRGVG KTTAARVFAK AVNCQKMIDD PVYRQEVTEP CGECESCLDF DAGTSLNISE FDAASNNSVD DIRQLRENVR YGPQKGRYRV YIIDEVHMLS TAAFNAFLKT LEEPPSHAIF IFATTELHKI PATISSRCQR FNFKRIPIGE IQSQLQMICR AETLQISDDA LLLIARKAQG SMRDAQSILD QVIAFSVGND AEKVIAYQGV AELLNYIDDD QFFDVSDAVA ENDPVKMLQV ARFVIDNGYD EQDFLEKLIE HFRNFLVLYN LRSTRLIERT ESVKERYQQS AGGLSAPLVM QLIDLLMKES GELKFQFEYQ FRFELTLLRL IELVHNDGGV AASVAGGPPV KKKAPEPDLK QPDRHPGPAG RSAPGARPAE LPSPASTPEQ QPPSARSASL PPSPQQSAPR NVASGKPGVD FSAWQGKLMN FTRNGSRKQP VQASSSDARQ SGVFEGVVEV EKFRMEWNQF LEMLLKKRQK VLVTHLRSCE LTSCSHGVLV MTCGKKFSYE ELMQDAALLS KEIESFYGIA VKLQICYDAA RDAQTREQTI FTLFRDLAET NDVMKYIIKE FGGELVY
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