Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1440 |
Symbol | |
ID | 6459013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1571697 |
End bp | 1572740 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642725427 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002016107 |
Protein GI | 194334247 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.738263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATC AGCCGTTAAA AAACGAACTA AAAGACCGGG AAGAAGAGGT CGCCGAACCA AAAAGAATAA CCCTCCGGGT AGCGCGCACA CAGACACCGA TGCGTATCGA TGTCTACCTT GCCCAGCAGG TTGAAAACGC CACGCGCAAC AAAGTTCAGG AAGCCATTGC CGAACATCGC GTACTGGTCA ACGGCAAAAC GATCAAGTCA AACTACCGCA TCAAATCACT TGATTCGATA GAGGTCACCT TTTTGCGGCC GCCGGCGCCG GAGCTCGCAC CGGAAGACAT TCCGATTGAC ATTATCTATG AAGACGAAGA CCTCATGGTA GTCAATAAGG CTTCCGATAT GGTGGTGCAT CCGGCATTCG GCAACTGGAC CGGCACTCTG GCCAACGCCA TTCTTCACCA CATCGGAAAA GAGGCCGGGG ATCTTGACTG TTCCGATATG CGCCCGGGCA TTGTTCACCG TCTCGACAAG AACACTTCCG GGCTGATCAT TATAGCCAAA AACAGCACCG CCCTTCACCG GCTTGCCCGA CAGTTCGCAA ACCGTCAGGT TGAAAAAAAA TACCAGGCAA TCGTCTGGGG AGTCCCTGAG CCTGCGACGG GGCTTATCAA AACCAATATC GGCAGATCGG TACGAAACAG GAAAGTCATG ACCAGCTATC CGTTTGAAGG AAAAGACGGA AAAACAGCGA TCACCGAATA CCGGGTCCAG CAAAGCCTTT GCTATTTTTC ACTTGTCGAA GTCACGCTCC ACACTGGCAG GACGCATCAG ATACGCGTCC ACATGCAGCA CCTGGGCCAC CCGATTCTCG GAGACGAAAC CTATGGCGGA AGCAGCATCA GAAATCTCCC GTTCAGTAAA AGCGAGAGTT TTGTCAAAAA TCTGCTCGAA ACCATCCCCC GCCAGGCCCT CCACGCCGAA AGCCTGACCT TCACACAGCC CACCACCGGT GAAAGGCTCT CCTTCACCGC CCCGCTACCC GAAGACATGC TGACAGCTCT GGAAAAAATT GAGACCGTAG TAAGGGGAGG GTGA
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Protein sequence | MQNQPLKNEL KDREEEVAEP KRITLRVART QTPMRIDVYL AQQVENATRN KVQEAIAEHR VLVNGKTIKS NYRIKSLDSI EVTFLRPPAP ELAPEDIPID IIYEDEDLMV VNKASDMVVH PAFGNWTGTL ANAILHHIGK EAGDLDCSDM RPGIVHRLDK NTSGLIIIAK NSTALHRLAR QFANRQVEKK YQAIVWGVPE PATGLIKTNI GRSVRNRKVM TSYPFEGKDG KTAITEYRVQ QSLCYFSLVE VTLHTGRTHQ IRVHMQHLGH PILGDETYGG SSIRNLPFSK SESFVKNLLE TIPRQALHAE SLTFTQPTTG ERLSFTAPLP EDMLTALEKI ETVVRGG
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