Gene Paes_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1435 
Symbol 
ID6459961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1561972 
End bp1562760 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content51% 
IMG OID642725422 
ProductBeta-lactamase 
Protein accessionYP_002016102 
Protein GI194334242 
COG category[V] Defense mechanisms 
COG ID[COG2602] Beta-lactamase class D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.716267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGA TGACTCTTTT GCTTTTTCTG CTTCTCATGC TTCCCGTGCC ATCCAATGCA 
CAGGACATCG ACACATCCCT GTTCAGAGGC TACGATACGG CTTTTGTGCT CCATAACAGT
TCTACCGCCC AAACAGAATC TGTTAATCCC GAGCTTTCTG CCCGCCGTCT CTCGCCCTGT
TCGACGTTTA AAATCTACAA TACGCTCTTC GGGCTGGAAC TTGGCCTGAT TAAGGGAGCG
GATGATCCCT GGTATACCTG GGACGGTGTT CAACGCGATA TCGAAGCCTG GAACCACGAT
CTGACCCTTC GCGAATCGTT CCGGGCCTCG GCTGTGCCAG CCTATCAGGT CCTTGCGCGT
CAGATCGGTC CGGACCGTAT GAAAACCTTC ATCGATAAGA TTGGTTATGG AACAGGGGAC
ATGGCATCCG GGATCGACAC CTTCTGGCTG CCACGTCCCG GAAAAACATC AATCATGATC
AGTGCAAATG AGCAGGTTTT TCTTCTCAAG AAGCTGCTCG AAGGAAAACT TCCGTTCTCC
AAAGAGCATG TGGCAATCCT GAAGGATATC ATGCTCTTCA AAGAAACCTG TAGAGGAAAA
CTCTACGGCA AGACCGGTTC CGGAATGGAT GAAGAGGGGC ACTGGAACCT GGGATGGTTT
GTCGGTTTTA TCGAATCCGG AGGAGAGGTG CACATCTTTG CCTGCAACAT CACCGATGGC
GATAATCCAT CAGGACTCAT TGCCCGCGAG ATCGTTATAG AGGTGCTGAA TGCAAAAGGT
CTCCTGTAG
 
Protein sequence
MNRMTLLLFL LLMLPVPSNA QDIDTSLFRG YDTAFVLHNS STAQTESVNP ELSARRLSPC 
STFKIYNTLF GLELGLIKGA DDPWYTWDGV QRDIEAWNHD LTLRESFRAS AVPAYQVLAR
QIGPDRMKTF IDKIGYGTGD MASGIDTFWL PRPGKTSIMI SANEQVFLLK KLLEGKLPFS
KEHVAILKDI MLFKETCRGK LYGKTGSGMD EEGHWNLGWF VGFIESGGEV HIFACNITDG
DNPSGLIARE IVIEVLNAKG LL